VIMSS216782 has 203 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-10 26.5 0.0 3.8e-10 25.9 0.0 1.2 1 VIMSS216782
Domain annotation for each sequence (and alignments):
>> VIMSS216782
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.9 0.0 3.8e-10 3.8e-10 3 173 .. 11 185 .. 10 189 .. 0.80
Alignments for each domain:
== domain 1 score: 25.9 bits; conditional E-value: 3.8e-10
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffdpetGelGeeFyarvdlessee.agaevdaeTikWW.lkqssearaellkddaksledalkeleefieened 96
+++D+Et g + +t a+++I+av++ ++ e G F + ++ e ga+++ ++++ k ++ r ++ +++ + d+++ +++ +++n+
VIMSS216782 11 VVVDVETGGFNsATDALLEIAAVTIGMD--EKGFLFPEHTYFHRVEPfEGANIEPAALEFTgIKLDHPLRMAVSEES--AMTDIFRGVRKALKANG- 102
689******8868999*******88533..33557777776666655479999****99953788899999988776..789**********7664. PP
Rv2179c-like 97 akslkvwgngasfDnviLraafelagle.ipwkfwndrdvrTlvela..ke..lglekkrdipfe.gvkhnAlddAkhqakiv 173
k ++g+++sfD+ L+aa +++l+ p++ + d Tl la + + ++ di f+ ++h+A +d + a+++
VIMSS216782 103 CKRAILVGHNSSFDLGFLNAAVARNDLKrNPFHPFSSFDTATLAGLAygQTvlARACQSADIDFDgREAHSARYDTEKTAELF 185
79999**********************8799************9999653332333567788888668899999999888765 PP
Or compare VIMSS216782 to CDD or PaperBLAST