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Align VIMSS303193 to PF16473 (Rv2179c-like)

VIMSS303193 has 813 amino acids

Query:       Rv2179c-like  [M=177]
Accession:   PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      5e-72  227.4   0.0      2e-71  225.4   0.0    2.0  2  VIMSS303193  


Domain annotation for each sequence (and alignments):
>> VIMSS303193  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.6   0.0      0.11      0.11      84     121 ..     191     223 ..     174     269 .. 0.73
   2 !  225.4   0.0     2e-71     2e-71       2     177 .]     632     803 ..     631     803 .. 0.98

  Alignments for each domain:
  == domain 1  score: -1.6 bits;  conditional E-value: 0.11
  Rv2179c-like  84 lkeleefieenedakslkvwgngasfDnviLraafela 121
                   +++l++ +     +++ kv+ n  + D+ +++a fe+ 
   VIMSS303193 191 IRDLHKLV-----RDTDKVFPNPGNSDLGLITAFFEAY 223
                   57788888.....5888999999999**9999999983 PP

  == domain 2  score: 225.4 bits;  conditional E-value: 2e-71
  Rv2179c-like   2 hlmiDiEtlgneetaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedak 98 
                   hlmiD+Et+g++++a+i+sIGa+ffdp+tG++G eF +++dle +   g+ +d +TikWWlkqs ea++++++d+ ++l+dal +l+efi en+ + 
   VIMSS303193 632 HLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETA---GGVIDRDTIKWWLKQSREAQSAIMTDE-IPLDDALLQLREFIDENSGEF 724
                   9*****************************************655...99**********************998.99******************* PP

  Rv2179c-like  99 slkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelakelglekkrdipfegvkhnAlddAkhqakivsaiw 177
                    ++vwgnga+fDn+iLr+++e+ g+++pw+++ndrdvrT+vel+k+++++++ +ipfeg++hnAlddA++qak+vs+iw
   VIMSS303193 725 FVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSVIW 803
                   ******************************************************************************9 PP



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