VIMSS33964 has 645 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-08 20.9 0.0 7.7e-08 18.4 0.0 2.1 1 VIMSS33964
Domain annotation for each sequence (and alignments):
>> VIMSS33964
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.4 0.0 7.7e-08 7.7e-08 3 175 .. 44 209 .. 42 211 .. 0.68
Alignments for each domain:
== domain 1 score: 18.4 bits; conditional E-value: 7.7e-08
Rv2179c-like 3 lmiDiEtlgne.......etaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefie 92
+++D+Et+g + + ai++IGav++ G + eF + v+++ s+ + v + + +++ ++a++++ +l + ef
VIMSS33964 44 VVVDLETTGGRttgndatPPDAITEIGAVKVC--GGAVLGEFATLVNPQHSIPPQ-IVRL----------TGIT-TAMVGNAPTIDAVLPMFFEFA- 125
6789998876533332334457999***9664..7788889******99998655.2222..........2233.34446689*************. PP
Rv2179c-like 93 enedakslkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelakelglekkrdipfe..........gvkhnAlddAkhqakivsa 175
+ +++++a fD+ Lraa ++++++ + + + + T++ ++ l+ ++ ++ + h AlddA++ + +++a
VIMSS33964 126 -----GDSVLVAHNAGFDIGFLRAAARRCDIT----WPQPQVLCTMRLARRVLSRDEAPSVRLAalarlfavasNPTHRALDDARATVDVLHA 209
.....57779***************9997554....44555666665555333333222222223334555677889********99998876 PP
Or compare VIMSS33964 to CDD or PaperBLAST