VIMSS356858 has 177 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-15 42.1 0.0 8.5e-15 41.0 0.0 1.5 1 VIMSS356858
Domain annotation for each sequence (and alignments):
>> VIMSS356858
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 41.0 0.0 8.5e-15 8.5e-15 2 173 .. 3 158 .. 2 161 .. 0.84
Alignments for each domain:
== domain 1 score: 41.0 bits; conditional E-value: 8.5e-15
Rv2179c-like 2 hlmiDiEtlgneetaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedak 98
++ D+Et+ + + + +sI++v++ e+ ++ +eFy+ +++e W +++ +e +a+ ++++++++++ +
VIMSS356858 3 FYAFDFETASYD-KHSACSIAIVKV--ENSRIVDEFYTLIKPETP------------FFWRNTQIHGIHESDVVNAPKFPEVWQQIQHCF-----QP 79
5788*****666.7788******66..589999*********655............56887777776666667889**********999.....46 PP
Rv2179c-like 99 slkvwgngasfDnviLraafelagleipwkfwndrdvrTlvelakelgl.ekkrdipfe......gvkhnAlddAkhqakiv 173
+ v++++asfD+++L+ ++ gle+p ++ + v+T ++l +e + ++k ++ +e +++h+Al+d +++a+i+
VIMSS356858 80 NRLVVAHNASFDCSVLAGCLDYYGLEQP-NYLSLCTVKTSRKLFPE--FpNHKLNTVCEnlnitlNNHHDALEDSRACAEIL 158
66899***********************.9*************988..334456666666788899************9986 PP
Or compare VIMSS356858 to CDD or PaperBLAST