VIMSS5058085 has 287 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-13 35.2 0.7 6.9e-12 31.6 0.7 2.2 1 VIMSS5058085
Domain annotation for each sequence (and alignments):
>> VIMSS5058085
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.6 0.7 6.9e-12 6.9e-12 2 168 .. 3 152 .. 2 160 .. 0.83
Alignments for each domain:
== domain 1 score: 31.6 bits; conditional E-value: 6.9e-12
Rv2179c-like 2 hlmiDiEtlgneetaaivsIGavffdpetGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaellkddaksledalkeleefieenedak 98
++iD+Et+ n++ a+i+s+G+ +f+ +Gel +e+y+ +d+++ g +v+ + i e +a+++ ++ ++l +
VIMSS5058085 3 FVAIDVETA-NANMASICSVGVAVFE--NGELAQEWYSLIDPRDY-FDGMNVSIHGID-----------ETQVVGAPTFAEITEQLGAML------- 77
589******.667**********997..**************766.578777766663...........44445789*************....... PP
Rv2179c-like 99 slkvwgngasfDnviLraafelagle...ipwkfwndrdvrTlvelake.lgl.ekkrdipfegvkhnAlddAkh 168
s +v+ fD v +++a + ++ + w + rT e a+ gl + + i ++hnAl+dAk+
VIMSS5058085 78 SDNVVVTHTHFDRVAMHQAARHWSVPpvtCTWLDSARVARRTWEECAQRgYGLaNVCKLIGHTFEHHNALEDAKA 152
47899999**********9888777444488888899999*******887888666666677799********97 PP
Or compare VIMSS5058085 to CDD or PaperBLAST