VIMSS5212692 has 220 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-12 33.4 0.1 6.2e-12 31.7 0.1 1.7 1 VIMSS5212692
Domain annotation for each sequence (and alignments):
>> VIMSS5212692
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.7 0.1 6.2e-12 6.2e-12 3 176 .. 24 204 .. 23 205 .. 0.79
Alignments for each domain:
== domain 1 score: 31.7 bits; conditional E-value: 6.2e-12
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavff.dpetGe..lGeeFyarvdlesseeagaevdaeTikWWl.kqssearaellkddaksledalkeleefieen 94
+++D+Et+g + +t a+++I+ + + ++G+ G +F+a +++ ga+ d + + r ++ +d++ l++++k ++e ++
VIMSS5212692 24 VVVDVETAGFNaQTDALLEIACIPIvYDAQGQfvPGPAFHAHINP-F---EGANLDRRSLDFIGiDPFNPMRIAMAEDERTALRRIFKSVNEVR-KQ 115
679******876888899999875523477865579********9.3...36788888888765145578999999999999999999999965.67 PP
Rv2179c-like 95 edakslkvwgngasfDnviLraafelagle..ipwkfwndrdvrTlvela..ke..lglekkrdipfe.gvkhnAlddAkhqakivsai 176
++ + ++g++a fD+ L+aa + g + p++ + + d Tl ++ + + + i+f+ +++h+Al+d + a+++ +i
VIMSS5212692 116 QHCTHAVLVGHNAHFDLGFLQAAIARSGTKnqNPFHSFSVMDTVTLSAVMfgQTvlAKACIQAGIEFDgKEAHSALYDTQKTAELFCYI 204
8889999*******************99965699************99986533223335566777777789********999987766 PP
Or compare VIMSS5212692 to CDD or PaperBLAST