VIMSS53608 has 243 amino acids
Query: Rv2179c-like [M=177]
Accession: PF16473.9
Description: 3'-5' exoribonuclease Rv2179c-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-12 33.3 1.3 2.8e-11 29.5 1.3 2.0 1 VIMSS53608
Domain annotation for each sequence (and alignments):
>> VIMSS53608
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.5 1.3 2.8e-11 2.8e-11 3 176 .. 39 217 .. 38 218 .. 0.76
Alignments for each domain:
== domain 1 score: 29.5 bits; conditional E-value: 2.8e-11
Rv2179c-like 3 lmiDiEtlgne.etaaivsIGavffd.petGelGeeFyarvdlesseeagaevdaeTikWWlkqssearaell.kddaksledalkeleefieen.. 94
++iD+Et+g + +t a+++I av++ e+G+l + ++++++ + ga+ ++++++ + ++ + +a s ++alke+++ ++++
VIMSS53608 39 VVIDVETAGFNaQTDALLEICAVTLSmDENGDLHPA--STIHFHVEPFEGANLEKAALEF-----TGIYDPFSpLRGAVSEDHALKEIYKLVRKEqk 128
689******8779999*******9962366775554..5556655656788999988875.....455555552334899999*********87754 PP
Rv2179c-like 95 .edakslkvwgngasfDnviLraafelagle.ipwkfwndrdvrTlvela..ke..lglekkrdipfe.gvkhnAlddAkhqakivsai 176
+d +++++a fD++ + aa e+++l+ +p++ + + d Tl la + + k+ ++f+ ++h+Al+d + a+++ +i
VIMSS53608 129 aADCSRAIIVAHNAHFDHSFVMAASERCKLKrVPFHPFATFDTATLSGLAfgQTvlAKACKTAGMEFDnREAHSALYDTQKTAELFCTI 217
45555666**********************88***************9997633222334455666668999*******9999887665 PP
Or compare VIMSS53608 to CDD or PaperBLAST