PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q10115 to PF17043 (MAT1-1-2)

SwissProt::Q10115 has 373 amino acids

Query:       MAT1-1-2  [M=146]
Accession:   PF17043.9
Description: Mating type protein 1-1-2 of unknown function
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.2e-36  111.8   0.0      2e-36  111.1   0.0    1.3  1  SwissProt::Q10115  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q10115  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.1   0.0     2e-36     2e-36      36     145 ..     143     270 ..     131     271 .. 0.92

  Alignments for each domain:
  == domain 1  score: 111.1 bits;  conditional E-value: 2e-36
           MAT1-1-2  36 yLkvflsiaddea.eeaPakefglvqne......vkvsdqgkkllvkvagdenwrvaplwHPlrrvPGspWnkFirNtq......lplF... 111
                         +++  s++  +a +e+P+k+fglv+++       ++ +++k+++v +ag++nw+v++++HPlrrvPG+pW+kF++N++      l+lF   
  SwissProt::Q10115 143 AFRLLRSLTLHKAaQEVPGKDFGLVYGKdvyvlnGHILHRSKQEIVGQAGGRNWHVDHTLHPLRRVPGTPWHKFFGNLEvgddkqLRLFddd 234
                        55666777766666*****************999789***********************************************99****** PP

           MAT1-1-2 112 ..teserkpkakikyilPesalvladefeseyeevr 145
                          ++s+r + +k+ +++Pe+a+++ de++se+++v+
  SwissProt::Q10115 235 aaVDSYRVGPQKFFVVIPETAEFILDEVSSEHQRVA 270
                        *********************************987 PP



Or compare SwissProt::Q10115 to CDD or PaperBLAST