PaperBLAST – Find papers about a protein or its homologs

 

Align ecocyc::G7317-MONOMER to PF17358 (DUF5384)

ecocyc::G7317-MONOMER has 179 amino acids

Query:       DUF5384  [M=145]
Accession:   PF17358.6
Description: Family of unknown function (DUF5384)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    1.6e-63  199.3  34.3      2e-63  199.1  34.3    1.0  1  ecocyc::G7317-MONOMER  


Domain annotation for each sequence (and alignments):
>> ecocyc::G7317-MONOMER  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  199.1  34.3     2e-63     2e-63       1     145 []      33     178 ..      33     178 .. 0.98

  Alignments for each domain:
  == domain 1  score: 199.1 bits;  conditional E-value: 2e-63
                DUF5384   1 eqqgk..edrkaaerkaeaereleeekarreaaaaakkrkRaaaaaaaaaaakekakaealadkkRdqsyEDelRkLeieerkleLar 86 
                            eqqgk  e+r+++e++ae++re+++ek+rr++a+aa++ kRaa+aaa+++a+++k++aea adkkRdqsyEDelR+Lei+++kl+La+
  ecocyc::G7317-MONOMER  33 EQQGKneEQRQHDEWVAERNREIQQEKQRRANAQAAAN-KRAATAAANKKARQDKLDAEASADKKRDQSYEDELRSLEIQKQKLALAK 119
                            788888899************************99999.9************************************************ PP

                DUF5384  87 qkarakRendfidqeLksqaAktDviqseADanRnvseGtkslleseGkakekkssswF 145
                            ++ar+kRen+fidqeLk++aA+tDv+qseADanRn++eG+++l++s+Gka+e+ks+swF
  ecocyc::G7317-MONOMER 120 EEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWF 178
                            **********************************************************9 PP



Or compare ecocyc::G7317-MONOMER to CDD or PaperBLAST