PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS94986 to PF17612 (DUF5507)

VIMSS94986 has 449 amino acids

Query:       DUF5507  [M=160]
Accession:   PF17612.6
Description: Family of unknown function (DUF5507)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.5e-91  289.8   6.3    3.9e-91  289.1   6.3    1.3  1  VIMSS94986  


Domain annotation for each sequence (and alignments):
>> VIMSS94986  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  289.1   6.3   3.9e-91   3.9e-91       1     160 []       1     160 [.       1     160 [. 1.00

  Alignments for each domain:
  == domain 1  score: 289.1 bits;  conditional E-value: 3.9e-91
     DUF5507   1 mlvsksngfnasavlgsgsynenksskhmellahsilklickeaasetyrgaletlqkmmseciyqegnafvimgageqlkrikyevgennlkvfnvhf 99 
                 ml+ ksngfnasav gsgsynenksskhmellahsi+klickeaasetyrgale lqk+mseciyqegnafvimgageqlkriky+v ennlkvfnvhf
  VIMSS94986   1 MLINKSNGFNASAVWGSGSYNENKSSKHMELLAHSIVKLICKEAASETYRGALEILQKIMSECIYQEGNAFVIMGAGEQLKRIKYDVDENNLKVFNVHF 99 
                 89************************************************************************************************* PP

     DUF5507 100 nnnhelvssgepdviclskqvwenlliklklennenvfsetkklsnknnadqffecakrne 160
                 +nn  lv+ gepdv+clskqvwenlliklk e +env se +k +nk + +q++e +krne
  VIMSS94986 100 DNNEVLVTDGEPDVVCLSKQVWENLLIKLKPEIKENVASEVHKSANKGEIEQLVEWSKRNE 160
                 ************************************************************8 PP



Or compare VIMSS94986 to CDD or PaperBLAST