PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q8GED8 to PF19585 (DUF6092)

SwissProt::Q8GED8 has 105 amino acids

Query:       DUF6092  [M=86]
Accession:   PF19585.3
Description: Family of unknown function (DUF6092)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.3e-33  101.4   0.5    1.5e-33  101.2   0.5    1.0  1  SwissProt::Q8GED8  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q8GED8  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  101.2   0.5   1.5e-33   1.5e-33       1      86 []      14      99 ..      14      99 .. 0.98

  Alignments for each domain:
  == domain 1  score: 101.2 bits;  conditional E-value: 1.5e-33
            DUF6092  1 eellellaYlltSArglldEPasYGplRlldaarrllelleeagksdeeleelreeieevkekamtdeeefaelLdeliaklaeel 86
                       ee+++l++Yll+S+rgll+EPa+YG +R+ d+arr+l+ll+e+g s ++l+++re+++ev+  +m++++++ ++Ld+l++++a++l
  SwissProt::Q8GED8 14 EEIALLAVYLLSSGRGLLEEPADYGIYRCTDGARRALQLLDEHGGSTARLTAVRERLDEVMFAPMGEDRDMGAILDDLCRQMADAL 99
                       7999*******************************************************************************975 PP



Or compare SwissProt::Q8GED8 to CDD or PaperBLAST