XP_005097110.1 has 1887 amino acids
Query: ZnF_RZ-type [M=54]
Accession: PF20173.2
Description: RZ type zinc finger domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-26 77.7 1.0 2.1e-26 77.7 1.0 4.4 7 XP_005097110.1
Domain annotation for each sequence (and alignments):
>> XP_005097110.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -6.3 3.8 1 1 13 20 .. 1278 1285 .. 1272 1293 .. 0.78
2 ? -9.7 7.7 1 1 24 38 .. 1388 1401 .. 1378 1411 .. 0.68
3 ? -7.1 5.8 1 1 25 37 .. 1419 1433 .. 1415 1440 .. 0.70
4 ? -8.6 6.7 1 1 25 39 .. 1437 1452 .. 1433 1454 .. 0.75
5 ? -13.7 11.0 1 1 23 38 .. 1472 1488 .. 1464 1490 .. 0.72
6 ? -2.6 0.1 0.25 0.25 29 41 .. 1567 1579 .. 1566 1579 .. 0.81
7 ! 77.7 1.0 2.1e-26 2.1e-26 7 53 .. 1802 1850 .. 1797 1851 .. 0.91
Alignments for each domain:
== domain 1 score: -6.3 bits; conditional E-value: 1
ZnF_RZ-type 13 kCpnGHpY 20
+Cp GH +
XP_005097110.1 1278 TCPGGHQC 1285
58888865 PP
== domain 2 score: -9.7 bits; conditional E-value: 1
ZnF_RZ-type 24 eCGrameesrCpeCg 38
eCG+ ++C +C+
XP_005097110.1 1388 ECGHLC-SGTCGRCQ 1401
565533.45666665 PP
== domain 3 score: -7.1 bits; conditional E-value: 1
ZnF_RZ-type 25 CGram..eesrCpeC 37
CG+a + s Cp C
XP_005097110.1 1419 CGHACraKCSDCPPC 1433
888873344667766 PP
== domain 4 score: -8.6 bits; conditional E-value: 1
ZnF_RZ-type 25 CGrameesrCp.eCga 39
C +a s+Cp Cga
XP_005097110.1 1437 CENACCHSKCPkACGA 1452
6667778899966887 PP
== domain 5 score: -13.7 bits; conditional E-value: 1
ZnF_RZ-type 23 geCGrameesrCp.eCg 38
+ C ++ e+ C+ +C+
XP_005097110.1 1472 ERCCQPCERPPCNmRCK 1488
56889999988886676 PP
== domain 6 score: -2.6 bits; conditional E-value: 0.25
ZnF_RZ-type 29 meesrCpeCgatI 41
+ ++ Cp C++ I
XP_005097110.1 1567 IAMKACPLCKSVI 1579
56789****9877 PP
== domain 7 score: 77.7 bits; conditional E-value: 2.1e-26
ZnF_RZ-type 7 g..tghwYkCpnGHpYvigeCGrameesrCpeCgatIGGeshnlaagnt 53
g +g+wYkC +GH+Y+igeCG+ameesrCpeC++tIGG++h+l+a+n+
XP_005097110.1 1802 GltKGAWYKCLKGHIYAIGECGQAMEESRCPECKSTIGGRDHRLNASNA 1850
33589*****************************************996 PP
Or compare XP_005097110.1 to CDD or PaperBLAST