PaperBLAST – Find papers about a protein or its homologs

 

Align XP_753757.2 to PF20238 (BIM1-like_dom)

XP_753757.2 has 239 amino acids

Query:       BIM1-like_dom  [M=140]
Accession:   PF20238.2
Description: Copper acquisition factor BIM1-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.7e-34  103.2   0.2    1.1e-33  102.8   0.2    1.2  1  XP_753757.2  


Domain annotation for each sequence (and alignments):
>> XP_753757.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.8   0.2   1.1e-33   1.1e-33       1     139 [.      23     199 ..      23     200 .. 0.84

  Alignments for each domain:
  == domain 1  score: 102.8 bits;  conditional E-value: 1.1e-33
  BIM1-like_dom   1 sahfallyPpsrg.........................fdedkentaPCGgfasvgnrtefpltggav.lllss...hpsanvavrlslgn.ptsn 66 
                    +ah+ ++yP  rg                         f + +e+++PCGg+++++nrt++p+ gga+ ++      h++a ++++l+lg+ p + 
    XP_753757.2  23 NAHTVITYPGYRGnnlhtngtveqsnglgqaevngsviFPYGMEWMYPCGGMPTTTNRTKWPVGGGAIaIQPGWfqgHQTALIYINLGLGTiPPN- 117
                    69*****************************************************************9665433556*************87555. PP

  BIM1-like_dom  67 sdfntl......leppvvqetgaGhfClpkvdlpss...a.Gtnatlqvvysge.g.alYqCadvtfvesasaksassstCfnst 139
                      +++       ++ p+++   +G++Clp+v+lp++   + G++at+qv+ +++ g alY+C+d++f e ++ ++ ++++Cfns+
    XP_753757.2 118 --MSHPmvppfqITGPTNDP-YPGTICLPQVPLPANtsvKpGDHATIQVIETAKhGaALYNCVDIEFAEPSEVEEVTRDNCFNSS 199
                    ..333300122233444444.78****************77**********6665458**********888889*********96 PP



Or compare XP_753757.2 to CDD or PaperBLAST