PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003050273.1 to PF20247 (DUF6602)

WP_003050273.1 has 241 amino acids

Query:       DUF6602  [M=104]
Accession:   PF20247.2
Description: Domain of unknown function (DUF6602)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.9e-35  106.6   0.0      4e-35  106.2   0.0    1.2  1  WP_003050273.1  


Domain annotation for each sequence (and alignments):
>> WP_003050273.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.2   0.0     4e-35     4e-35       4     104 .]      25     127 ..      22     127 .. 0.95

  Alignments for each domain:
  == domain 1  score: 106.2 bits;  conditional E-value: 4e-35
         DUF6602   4 sskikhpgtkGderEealkelLrkyLpkkyevtsgfiidsegntskqiDiviydrsstpllf..egslvipaesVyavievKstLnkkelkkaie 96 
                     ++++ hpgtkGd++E++++++L+ yLpk+y+ ++++++ds gn+s+qiD+v++dr+++p++f  e++++ipaesVyav+e K+t ++  + +a e
  WP_003050273.1  25 RKTFGHPGTKGDASENVWIDMLDTYLPKRYQAAKAHVVDSLGNFSQQIDVVVFDRQYSPFIFtyENETIIPAESVYAVFEAKQTADAGLVAYAQE 119
                     7899****************************************************99**7766666779*****************88****** PP

         DUF6602  97 klksvkel 104
                     k++sv++l
  WP_003050273.1 120 KVASVRRL 127
                     ******98 PP



Or compare WP_003050273.1 to CDD or PaperBLAST