PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS369206 to PF20398 (DUF6691)

VIMSS369206 has 155 amino acids

Query:       DUF6691  [M=142]
Accession:   PF20398.2
Description: Family of unknown function (DUF6691)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-55  172.9   9.3    2.8e-55  172.7   9.3    1.0  1  VIMSS369206  


Domain annotation for each sequence (and alignments):
>> VIMSS369206  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.7   9.3   2.8e-55   2.8e-55       5     138 ..       6     139 ..       1     143 [. 0.97

  Alignments for each domain:
  == domain 1  score: 172.7 bits;  conditional E-value: 2.8e-55
      DUF6691   5 mallvgllfglglivsgltdpakvigfldlagawdpslafvmggailvglvafrlarkrdksllgaplrlpaatdidrrlvlgslafgagwglagfcp 102
                   all gl+fglgli+sg+tdpakv++fld+ag wdpsl fvm gai +g  afr a++r ++ll +p+ lp + ++d rl+lgsl fg+gwgl g cp
  VIMSS369206   6 TALLSGLVFGLGLILSGMTDPAKVLSFLDVAGLWDPSLMFVMLGAISIGFFAFRAAKRRGRTLLSTPVHLPGTRTVDLRLILGSLLFGMGWGLVGICP 103
                  689*********************************************************************************************** PP

      DUF6691 103 gpalaslasggskplifvaamlagmalfellerlaa 138
                  gp l   asg ++ ++f+ aml gm +f+ le+ ++
  VIMSS369206 104 GPGLVLAASGHTGGIVFMVAMLLGMFIFDRLEKHRQ 139
                  ********************************9887 PP



Or compare VIMSS369206 to CDD or PaperBLAST