PaperBLAST – Find papers about a protein or its homologs

 

Align WP_006575466.1 to TIGR00001

WP_006575466.1 has 65 amino acids

Query:       TIGR00001  [M=63]
Accession:   TIGR00001
Description: rpmI_bact: ribosomal protein bL35
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.6e-28   82.6   8.1      1e-27   82.5   8.1    1.0  1  WP_006575466.1  


Domain annotation for each sequence (and alignments):
>> WP_006575466.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5   8.1     1e-27     1e-27       1      63 []       2      64 ..       2      64 .. 0.99

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 1e-27
       TIGR00001  1 pKmKTkkaaaKRFkvtgsGkikrkkagkrHlltkKsskrkRqLrkkalvsksdlkrvkllLpy 63
                    pKmKTkk+a+KRF    +G +kr +a+krH+ltkK++k+kRqLr+++ v++++lk+v++++py
  WP_006575466.1  2 PKMKTKKSASKRFTARPNGSFKRGQAFKRHILTKKTTKNKRQLRGTQDVHETNLKSVRAMMPY 64
                    9*************************************************************8 PP



Or compare WP_006575466.1 to CDD or PaperBLAST