PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF01817 (CM_2)

PF01817 hits 149 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

TyrA / b2600 fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
tyrA / P07023 fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli (strain K12) (see 12 papers)
Aligns to 9:87 / 373 (21.2%), covers 98.7% of PF01817, 81.5 bits

P43902 prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae (see paper)
Aligns to 11:89 / 377 (21.0%), covers 98.7% of PF01817, 79.3 bits

CHMU_METJA / Q57696 Chorismate mutase; CM; Monofunctional chorismate mutase AroQ(f); EC 5.4.99.5 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
Aligns to 9:87 / 99 (79.8%), covers 100.0% of PF01817, 76.4 bits

Echvi_0120 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase / chorismate mutase (EC 2.5.1.54; EC 5.4.99.5) from Echinicola vietnamensis KMM 6221, DSM 17526
Aligns to 276:354 / 367 (21.5%), covers 100.0% of PF01817, 75.6 bits

A8AAX2 prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis (see 2 papers)
Aligns to 13:91 / 348 (22.7%), covers 98.7% of PF01817, 72.0 bits

CMPDT_STUST / P27603 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Stutzerimonas stutzeri (Pseudomonas stutzeri) (see paper)
Aligns to 11:93 / 365 (22.7%), covers 100.0% of PF01817, 70.5 bits

CMPDT_BUCAI / P57472 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) (see paper)
P57472 prephenate dehydratase (EC 4.2.1.51) from Buchnera aphidicola (see paper)
Aligns to 11:89 / 385 (20.5%), covers 100.0% of PF01817, 69.9 bits

CHMU_SALTM / Q93LJ4 Monofunctional chorismate mutase; EC 5.4.99.5 from Salmonella typhimurium (see paper)
Aligns to 29:99 / 181 (39.2%), covers 87.3% of PF01817, 67.2 bits

C7EXK8 prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli (see 2 papers)
Aligns to 11:89 / 386 (20.5%), covers 100.0% of PF01817, 66.8 bits

PheA / b2599 fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
pheA / P0A9J8 fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli (strain K12) (see 16 papers)
CMPDT_ECOLI / P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12) (see paper)
Aligns to 11:89 / 386 (20.5%), covers 100.0% of PF01817, 66.8 bits

CHMU_ENTAG / P42517 Monofunctional chorismate mutase; CM-F; EC 5.4.99.5 from Enterobacter agglomerans (Erwinia herbicola) (Pantoea agglomerans) (see 2 papers)
Aligns to 30:99 / 181 (38.7%), covers 84.8% of PF01817, 66.5 bits

pchB / Q51507 isochorismate pyruvate lyase (EC 4.2.99.21) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
PCHB_PSEAE / Q51507 Isochorismate pyruvate lyase; IPL; Chorismate mutase; CM; Salicylate biosynthesis protein; EC 4.2.99.21; EC 5.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 6 papers)
Q51507 isochorismate lyase (EC 4.2.99.21) from Pseudomonas aeruginosa (see 3 papers)
Aligns to 14:91 / 101 (77.2%), covers 98.7% of PF01817, 65.6 bits

CA265_RS11635 chorismate mutase (EC 5.4.99.5); 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Pedobacter sp. GW460-11-11-14-LB5
Aligns to 279:357 / 379 (20.8%), covers 98.7% of PF01817, 63.3 bits

P39912 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54); chorismate mutase (EC 5.4.99.5) from Bacillus subtilis (see paper)
Aligns to 10:87 / 358 (21.8%), covers 100.0% of PF01817, 63.1 bits

PAPB_STRPR / P72541 4-amino-4-deoxychorismate mutase; ADC mutase; EC 5.4.99.67 from Streptomyces pristinaespiralis (see paper)
P72541 4-amino-4-deoxychorismate mutase (EC 5.4.99.67) from Streptomyces pristinaespiralis (see paper)
Aligns to 26:104 / 129 (61.2%), covers 98.7% of PF01817, 59.8 bits

cmlD / F2RB77 4-amino-4-deoxychorismate mutase (EC 5.4.99.67) from Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) (see 2 papers)
Aligns to 11:89 / 103 (76.7%), covers 98.7% of PF01817, 56.5 bits

SCMU_MYCTU / P9WIB9 Secreted chorismate mutase; CM; *MtCM; EC 5.4.99.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 5 papers)
Aligns to 40:110 / 199 (35.7%), covers 87.3% of PF01817, 48.9 bits

SCMU_MYCS2 / A0QU81 Secreted chorismate mutase; CM; EC 5.4.99.5 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
Aligns to 28:97 / 181 (38.7%), covers 86.1% of PF01817, 47.7 bits

Q2SY64 chorismate mutase (EC 5.4.99.5) from Burkholderia thailandensis (see paper)
Aligns to 40:110 / 202 (35.1%), covers 88.6% of PF01817, 47.7 bits

O30012 prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus (see paper)
Aligns to 270:345 / 620 (12.3%), covers 100.0% of PF01817, 47.2 bits

SCMU_YERPE / Q7CHH5 Secreted chorismate mutase; CM; *YpCM; EC 5.4.99.5 from Yersinia pestis (see paper)
Q7CHH5 chorismate mutase (EC 5.4.99.5) from Yersinia pestis (see paper)
Aligns to 35:104 / 186 (37.6%), covers 83.5% of PF01817, 46.7 bits

CHMU_MYCTU / P9WIC1 Intracellular chorismate mutase; CM; EC 5.4.99.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
P9WIC1 chorismate mutase (EC 5.4.99.5) from Mycobacterium tuberculosis (see 3 papers)
Aligns to 33:95 / 105 (60.0%), covers 68.4% of PF01817, 44.3 bits

CHMU_PSEAE / Q9HU05 Monofunctional chorismate mutase; EC 5.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
Aligns to 31:101 / 185 (38.4%), covers 89.9% of PF01817, 42.3 bits

B2JYH9 chorismate mutase (EC 5.4.99.5) from Paraburkholderia phymatum (see paper)
Aligns to 26:95 / 182 (38.5%), covers 87.3% of PF01817, 42.1 bits

Q74NC4 prephenate dehydratase (EC 4.2.1.51) from Nanoarchaeum equitans (see paper)
Aligns to 244:322 / 591 (13.4%), covers 98.7% of PF01817, 40.3 bits

CHMU_MYCS2 / A0R3N5 Intracellular chorismate mutase; CM; EC 5.4.99.5 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
Aligns to 31:96 / 104 (63.5%), covers 69.6% of PF01817, 39.3 bits

Q3LUE0 chorismate mutase (EC 5.4.99.5) from Heterodera schachtii (see paper)
Aligns to 101:170 / 275 (25.5%), covers 87.3% of PF01817, 36.3 bits

B6C761 chorismate mutase (EC 5.4.99.5) from Globodera rostochiensis (see paper)
Aligns to 110:179 / 286 (24.5%), covers 87.3% of PF01817, 35.3 bits

Or search for genetic data about PF01817 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory