PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF01205 (UPF0029)

PF01205 hits 45 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BC5199 Xaa-Pro dipeptidase from Bacillus cereus ATCC 14579
Aligns to 19:124 / 211 (50.2%), covers 99.1% of PF01205, 143.0 bits

P32437 IMPACT family member YvyE from Bacillus subtilis (strain 168)
BSU35510 hypothetical protein from Bacillus subtilis subsp. subtilis str. 168
Aligns to 19:124 / 217 (48.8%), covers 98.1% of PF01205, 141.0 bits

lmo2516 similar to conserved hypothetical proteins from Listeria monocytogenes EGD-e
Aligns to 19:124 / 211 (50.2%), covers 99.1% of PF01205, 140.9 bits

LLKF_1118 hypothetical protein from Lactococcus lactis subsp. lactis KF147
Aligns to 16:121 / 209 (50.7%), covers 100.0% of PF01205, 140.8 bits

USA300HOU_0775 hypothetical membrane protein from Staphylococcus aureus subsp. aureus USA300_TCH1516
SAUSA300_0732 hypothetical protein from Staphylococcus aureus subsp. aureus USA300_FPR3757
Aligns to 19:124 / 213 (49.8%), covers 99.1% of PF01205, 140.2 bits

SA0703 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 19:124 / 213 (49.8%), covers 99.1% of PF01205, 140.2 bits

spr2014 Conserved hypothetical protein from Streptococcus pneumoniae R6
Aligns to 17:122 / 211 (50.2%), covers 99.1% of PF01205, 139.7 bits

G7SDH9 Xaa-Pro dipeptidase from Streptococcus suis D12
Aligns to 18:123 / 210 (50.5%), covers 100.0% of PF01205, 139.6 bits

CD630_07910 YigZ family protein from Clostridioides difficile 630
Aligns to 18:123 / 214 (49.5%), covers 96.2% of PF01205, 139.4 bits

BH3630 hypothetical protein from Bacillus halodurans C-125
Aligns to 19:124 / 213 (49.8%), covers 98.1% of PF01205, 137.8 bits

X276_04450 YigZ family protein from Clostridium beijerinckii NRRL B-598
Aligns to 17:122 / 215 (49.3%), covers 99.1% of PF01205, 137.7 bits

M5005_Spy_1328 Xaa-Pro dipeptidase from Streptococcus pyogenes MGAS5005
SPy1617 conserved hypothetical protein from Streptococcus pyogenes M1 GAS
Aligns to 18:123 / 210 (50.5%), covers 100.0% of PF01205, 137.0 bits

SCO1302 hypothetical protein from Streptomyces coelicolor A3(2)
Aligns to 19:124 / 208 (51.0%), covers 99.1% of PF01205, 126.6 bits

PG0124 conserved hypothetical protein from Porphyromonas gingivalis W83
Aligns to 20:125 / 206 (51.5%), covers 100.0% of PF01205, 126.0 bits

ERH_0029 YigZ family protein from Erysipelothrix rhusiopathiae str. Fujisawa
Aligns to 20:122 / 202 (51.0%), covers 97.2% of PF01205, 124.8 bits

FTN_0466 hypothetical protein from Francisella tularensis subsp. novicida U112
Aligns to 19:123 / 200 (52.5%), covers 99.1% of PF01205, 124.4 bits

TM1713 proline dipeptidase, putative from Thermotoga maritima MSB8
Aligns to 17:121 / 191 (55.0%), covers 99.1% of PF01205, 122.8 bits

P44842 IMPACT family member HI_0722 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Aligns to 18:125 / 206 (52.4%), covers 100.0% of PF01205, 122.2 bits

HI0722 hypothetical protein from Haemophilus influenzae Rd KW20
Aligns to 22:129 / 210 (51.4%), covers 100.0% of PF01205, 122.2 bits

FTA_0467 hypothetical protein from Francisella tularensis subsp. holarctica FTA
Aligns to 19:123 / 200 (52.5%), covers 99.1% of PF01205, 121.4 bits

Q9JXA1 Impact N-terminal domain-containing protein from Neisseria meningitidis serogroup B (strain MC58)
Aligns to 19:124 / 203 (52.2%), covers 100.0% of PF01205, 121.3 bits

YigZ / b3848 IMPACT family member YigZ from Escherichia coli K-12 substr. MG1655 (see 7 papers)
YIGZ_ECOLI / P27862 IMPACT family member YigZ from Escherichia coli (strain K12) (see paper)
yigZ / RF|NP_418290 IMPACT family member yigZ from Escherichia coli K12 (see paper)
Aligns to 18:125 / 204 (52.9%), covers 100.0% of PF01205, 119.3 bits

Z5370 orf, hypothetical protein from Escherichia coli O157:H7 EDL933
Aligns to 19:126 / 205 (52.7%), covers 100.0% of PF01205, 118.8 bits

SMc01701 CONSERVED HYPOTHETICAL PROTEIN from Sinorhizobium meliloti 1021
Aligns to 15:115 / 194 (52.1%), covers 99.1% of PF01205, 117.4 bits

VC2757 conserved hypothetical protein from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 20:127 / 210 (51.4%), covers 100.0% of PF01205, 116.0 bits

MHO_1400 hypothetical protein from Mycoplasma hominis
Aligns to 21:127 / 132 (81.1%), covers 98.1% of PF01205, 115.6 bits

PP0593 conserved hypothetical protein TIGR00257 from Pseudomonas putida KT2440
Aligns to 16:116 / 194 (52.1%), covers 100.0% of PF01205, 114.9 bits

IMPCT_XENLA / Q9W625 Protein IMPACT; Imprinted and ancient gene protein homolog; Ximpact from Xenopus laevis (African clawed frog) (see paper)
Aligns to 179:286 / 312 (34.6%), covers 100.0% of PF01205, 109.4 bits

IMPCT_HUMAN / Q9P2X3 Protein IMPACT; Imprinted and ancient gene protein homolog from Homo sapiens (Human) (see 2 papers)
NP_060909 protein IMPACT from Homo sapiens
Aligns to 182:289 / 320 (33.8%), covers 100.0% of PF01205, 106.6 bits

XP_011245152 protein IMPACT isoform X1 from Mus musculus
Aligns to 163:270 / 300 (36.0%), covers 100.0% of PF01205, 106.6 bits

IMPCT_MOUSE / O55091 Protein IMPACT; Imprinted and ancient gene protein from Mus musculus (Mouse) (see 6 papers)
Aligns to 181:288 / 318 (34.0%), covers 100.0% of PF01205, 106.5 bits

P32438 IMPACT family member in pol 5'region (Fragment) from Thermus thermophilus
Aligns to 3:102 / 179 (55.9%), covers 99.1% of PF01205, 106.3 bits

Q5GFD9 Protein IMPACT from Rattus norvegicus
Aligns to 180:287 / 317 (34.1%), covers 100.0% of PF01205, 105.6 bits

YIH1_YEAST / P25637 Protein IMPACT homolog from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 7 papers)
NP_009985 Yih1p from Saccharomyces cerevisiae S288C
YCR059C Protein that inhibits activation of Gcn2p, an eIF2 alpha subunit protein kinase, by competing for Gcn1p binding, thus impacting gene expression in response to starvation; has sequence and functional similarity to the mouse IMPACT gene from Saccharomyces cerevisiae
Aligns to 144:251 / 258 (41.9%), covers 100.0% of PF01205, 105.5 bits

Cj0429c hypothetical protein Cj0429c from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 15:119 / 194 (54.1%), covers 100.0% of PF01205, 105.2 bits

SPAC27E2.02 IMPACT homolog from Schizosaccharomyces pombe
Aligns to 153:259 / 280 (38.2%), covers 100.0% of PF01205, 102.0 bits

T551_03102 uncharacterized protein from Pneumocystis jirovecii RU7
Aligns to 143:249 / 267 (40.1%), covers 100.0% of PF01205, 97.0 bits

HP1485 conserved hypothetical protein from Helicobacter pylori 26695
Aligns to 15:118 / 190 (54.7%), covers 97.2% of PF01205, 95.5 bits

YD177_YEAST / Q12257 IMPACT family member YDL177C from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
YDL177C Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene from Saccharomyces cerevisiae
Aligns to 21:163 / 170 (84.1%), covers 99.1% of PF01205, 95.2 bits

HPYLSS1_01411 YigZ family protein from Helicobacter pylori SS1
Aligns to 15:118 / 190 (54.7%), covers 96.2% of PF01205, 95.2 bits

PNEG_03438 hypothetical protein from Pneumocystis murina B123
Aligns to 143:249 / 270 (39.6%), covers 100.0% of PF01205, 94.7 bits

cgd2_2430 ximpact ortholog conserved protein seen in bacteria and eukaryotes from Cryptosporidium parvum Iowa II
Aligns to 145:265 / 290 (41.7%), covers 99.1% of PF01205, 93.1 bits

MELLADRAFT_110829 uncharacterized protein from Melampsora larici-populina 98AG31
Aligns to 59:176 / 283 (41.7%), covers 99.1% of PF01205, 85.0 bits

SPO0940 YigZ family protein from Ruegeria pomeroyi DSS-3
Aligns to 14:115 / 122 (83.6%), covers 99.1% of PF01205, 77.6 bits

SPBC14C8.09c conserved fungal protein from Schizosaccharomyces pombe
Aligns to 37:138 / 144 (70.8%), covers 93.4% of PF01205, 66.3 bits

Or search for genetic data about PF01205 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory