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Family Search for PF01940 (DUF92)

PF01940.16 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AFUA_2G15640 DUF92 domain protein from Aspergillus fumigatus Af293
Aligns to 8:347 / 372 (91.4%), covers 99.6% of PF01940, 288.5 bits

PGR_ARATH / Q0WP96 Protein PGR; AtPGR; Plasma membrane glucose-responsive regulator; Transmembrane protein 19-like protein; VTE6-related protein; VTE6R from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT5G19930 integral membrane family protein (RefSeq) from Arabidopsis thaliana
Aligns to 14:277 / 288 (91.7%), covers 99.6% of PF01940, 260.4 bits

Q96HH6 Transmembrane protein 19 from Homo sapiens
Aligns to 59:322 / 336 (78.6%), covers 99.2% of PF01940, 257.2 bits

alr1612 hypothetical protein (NCBI ptt file) from Nostoc sp. PCC 7120
Aligns to 18:250 / 265 (87.9%), covers 99.2% of PF01940, 188.6 bits

CND01270 hypothetical protein (RefSeq) from Cryptococcus neoformans var. neoformans JEC21
Aligns to 1:237 / 246 (96.3%), covers 79.2% of PF01940, 186.4 bits

sll0875 hypothetical protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 25:245 / 258 (85.7%), covers 98.3% of PF01940, 185.5 bits

Mbar_A3310 integral membrane protein (NCBI) from Methanosarcina barkeri str. fusaro
Aligns to 220:440 / 451 (49.0%), covers 98.3% of PF01940, 178.8 bits

MJ_0933 TIGR00297 family protein from Methanocaldococcus jannaschii DSM 2661
Aligns to 8:219 / 229 (92.6%), covers 99.2% of PF01940, 177.3 bits

rrnAC1718 unknown (NCBI) from Haloarcula marismortui ATCC 43049
Aligns to 121:348 / 354 (64.4%), covers 85.2% of PF01940, 171.3 bits

LOC100283913 putative conserved membrane protein from Zea mays
Aligns to 81:305 / 320 (70.3%), covers 97.9% of PF01940, 161.9 bits

VTE6_ARATH / Q9SYM0 Protein VTE6, chloroplastic; Phytyl-P kinase; Vitamin E deficient 6; EC 2.7.4.- from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT1G78620 integral membrane family protein (RefSeq) from Arabidopsis thaliana
NP_565184 integral membrane protein (Protein of unknown function DUF92, transmembrane) from Arabidopsis thaliana
Aligns to 93:317 / 333 (67.6%), covers 95.3% of PF01940, 158.9 bits

Q59239 cyclomaltodextrin glucanotransferase (EC 2.4.1.19) from Bacillus sp. (in: Bacteria) (see paper)
BAA02380.1 β-cyclodextrin glucanotransferase (EC 2.4.1.19) (see protein)
Aligns to 1:41 / 725 (5.7%), covers 15.7% of PF01940, 35.5 bits

Or search for genetic data about PF01940 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory