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Family Search for PF02639 (DUF188)

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Running HMMer for PF02639

PF02639 hits 21 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Spro_3465 protein of unknown function DUF188 from Serratia proteamaculans 568
Aligns to 18:147 / 152 (85.5%), covers 98.5% of PF02639, 175.3 bits

YPO3033 conserved hypothetical protein from Yersinia pestis CO92
Aligns to 17:146 / 152 (85.5%), covers 98.5% of PF02639, 172.8 bits

STM0387 putative cytoplasmic protein from Salmonella typhimurium LT2
Aligns to 17:146 / 151 (86.1%), covers 97.7% of PF02639, 166.6 bits

YaiI / b0387 DUF188 domain-containing protein YaiI from Escherichia coli K-12 substr. MG1655 (see paper)
yaiI / ECOCYC|G6230-MONOMER UPF0178 protein yaiI from Escherichia coli K12 (see paper)
b0387 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 17:146 / 152 (85.5%), covers 97.7% of PF02639, 165.2 bits

VP2328 conserved hypothetical protein from Vibrio parahaemolyticus RIMD 2210633
Aligns to 17:146 / 147 (88.4%), covers 99.2% of PF02639, 157.5 bits

ABBFA_000867 hypothetical protein from Acinetobacter baumannii AB307-0294
Aligns to 15:144 / 150 (86.7%), covers 97.7% of PF02639, 155.7 bits

HMPREF0010_02122 YaiI/YqxD family protein from Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Aligns to 26:155 / 161 (80.7%), covers 97.7% of PF02639, 155.4 bits

Bphyt_5655 protein of unknown function DUF188 from Burkholderia phytofirmans PsJN
Aligns to 17:146 / 165 (78.8%), covers 98.5% of PF02639, 155.1 bits

CC1215 conserved hypothetical protein from Caulobacter crescentus CB15
Aligns to 17:146 / 153 (85.0%), covers 98.5% of PF02639, 154.9 bits

CAETHG_RS07860 YaiI/YqxD family protein from Clostridium autoethanogenum DSM 10061
Aligns to 15:143 / 147 (87.8%), covers 99.2% of PF02639, 144.7 bits

Q9KD45 UPF0178 protein BH1374 from Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Aligns to 24:153 / 157 (82.8%), covers 98.5% of PF02639, 144.5 bits

BSU25230 hypothetical protein from Bacillus subtilis subsp. subtilis str. 168
Aligns to 28:158 / 164 (79.9%), covers 99.2% of PF02639, 143.6 bits

Q837J5 UPF0178 protein EF_0842 from Enterococcus faecalis (strain ATCC 700802 / V583)
EF_0842 YaiI/YqxD family protein from Enterococcus faecalis V583
Aligns to 15:146 / 148 (89.2%), covers 98.5% of PF02639, 142.9 bits

SERP0336 hypothetical protein from Staphylococcus epidermidis RP62A
Aligns to 17:148 / 149 (88.6%), covers 98.5% of PF02639, 141.2 bits

SA0636 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 16:147 / 152 (86.8%), covers 98.5% of PF02639, 139.5 bits

NWMN_0650 hypothetical protein from Staphylococcus aureus subsp. aureus str. Newman
SACOL0741 hypothetical protein from Staphylococcus aureus subsp. aureus COL
Aligns to 16:147 / 152 (86.8%), covers 98.5% of PF02639, 139.3 bits

SAR0734 conserved hypothetical protein from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 16:147 / 152 (86.8%), covers 98.5% of PF02639, 139.1 bits

D5ANM3 UPF0178 protein RCAP_rcc00612 from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Aligns to 15:145 / 148 (88.5%), covers 100.0% of PF02639, 138.1 bits

LMRG_00908 hypothetical protein from Listeria monocytogenes 10403S
Aligns to 16:145 / 146 (89.0%), covers 98.5% of PF02639, 127.4 bits

Q71ZL4 UPF0178 protein LMOf2365_1475 from Listeria monocytogenes serotype 4b (strain F2365)
LMOf2365_1475 hypothetical protein from Listeria monocytogenes str. 4b F2365
Aligns to 16:145 / 146 (89.0%), covers 98.5% of PF02639, 126.8 bits

BAPKO_0028 hypothetical protein from Borrelia afzelii PKo
Aligns to 19:142 / 143 (86.7%), covers 95.4% of PF02639, 78.0 bits

Or search for genetic data about PF02639 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory