PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF02694 (UPF0060)

PF02694.15 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

sll0793 hypothetical protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 2:108 / 108 (99.1%), covers 100.0% of PF02694, 176.0 bits

BSU08120 hypothetical protein (RefSeq) from Bacillus subtilis subsp. subtilis str. 168
Aligns to 2:109 / 109 (99.1%), covers 100.0% of PF02694, 170.8 bits

YnfA / b1582 putative transporter YnfA from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YNFA_ECOLI / P76169 UPF0060 membrane protein YnfA from Escherichia coli (strain K12) (see 2 papers)
ynfA / RF|NP_416099 UPF0060 membrane protein ynfA from Escherichia coli K12 (see paper)
b1582 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:108 / 108 (100.0%), covers 99.1% of PF02694, 164.8 bits

Rv2639c hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 2:109 / 110 (98.2%), covers 100.0% of PF02694, 163.9 bits

BHW77_15920 YnfA family protein from Escherichia coli
Aligns to 1:108 / 108 (100.0%), covers 99.1% of PF02694, 162.1 bits

SAR2425 putative membrane protein (NCBI) from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 1:108 / 108 (100.0%), covers 99.1% of PF02694, 139.8 bits

SACOL2333 YnfA family protein (NCBI) from Staphylococcus aureus subsp. aureus COL
Aligns to 1:108 / 108 (100.0%), covers 99.1% of PF02694, 137.9 bits

XOC_3249 YnfA family protein from Xanthomonas oryzae pv. oryzicola BLS256
Aligns to 5:110 / 111 (95.5%), covers 95.3% of PF02694, 136.4 bits

RR42_RS34240 putative efflux pump, required for thallium (I) resistance from Cupriavidus basilensis FW507-4G11
Aligns to 1:105 / 105 (100.0%), covers 97.2% of PF02694, 121.2 bits

Ga0059261_1942 putative efflux pump, required for thallium (I) resistance from Sphingomonas koreensis DSMZ 15582
Aligns to 1:106 / 109 (97.2%), covers 97.2% of PF02694, 109.4 bits

AO356_03600 putative efflux pump, required for thallium (I) resistance from Pseudomonas fluorescens FW300-N2C3
Aligns to 1:107 / 110 (97.3%), covers 95.3% of PF02694, 100.6 bits

PA3275 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 1:107 / 109 (98.2%), covers 95.3% of PF02694, 94.5 bits

Or search for genetic data about PF02694 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory