Family Search for PF03665 (UPF0172)
PF03665.13 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
EMC8_HUMAN / O43402 ER membrane protein complex subunit 8; Neighbor of COX4; Protein FAM158B from Homo sapiens (Human) (see paper)
Aligns to 3:202 / 210 (95.2%), covers 99.5% of PF03665, 220.0 bits
O70378 ER membrane protein complex subunit 8 from Mus musculus
Aligns to 3:199 / 207 (95.2%), covers 99.5% of PF03665, 219.6 bits
- Proteomic Analysis of 3T3-L1 Adipocytes Treated with Insulin and TNF-α.
Chan, Proteomes 2019 - “...splicing factor 5 Srsf5 0.001389 + P02463 Collagen alpha-1(IV) chain Col4a1 0.001912 + + + O70378 ER membrane protein complex subunit 8 Emc8 0.003163 Q9ESW4 Acylglycerol kinase, mitochondrial Agk 0.003542 O35640 Annexin A8 Anxa8 0.003733 + + Q8BX10 Serine/threonine-protein phosphatase, mito. Pgam5 0.004051 + Q9WVA4 Transgelin-2...”
XP_002522792 ER membrane protein complex subunit 8/9 homolog from Ricinus communis
Aligns to 8:202 / 204 (95.6%), covers 100.0% of PF03665, 197.6 bits
EMC9_HUMAN / Q9Y3B6 ER membrane protein complex subunit 9; Protein FAM158A from Homo sapiens (Human) (see paper)
Aligns to 3:191 / 208 (90.9%), covers 100.0% of PF03665, 193.0 bits
- subunit: Component of the ER membrane protein complex (EMC).
AT5G55940 emb2731 (embryo defective 2731) (RefSeq) from Arabidopsis thaliana
Aligns to 10:206 / 208 (94.7%), covers 100.0% of PF03665, 186.7 bits
- Mediator of tolerance to abiotic stress ERF6 regulates susceptibility of Arabidopsis to Meloidogyne incognita
Warmerdam, Molecular plant pathology 2019 - “...At5G55840 22602265 G:T 17:332 4.3 8.07 At5G55840 19 5 22668012 A:G 63:286 4.9 5.24 At5G55970 At5G55940, At5G55950, At5G55960, At5G55970, At5G55980, At5G55990, At5G56000, At5G56010, At5G56020, At5G56030 At5G56040 22683923 C:G 31:318 4 5.72 At5G56010 22684613 C:T 29:320 4.1 5.89 At5G56020 *QTL1 to QTL4 have been identified previously (Warmerdam...”
- Transcriptional profiling analysis in Populus yunnanensis provides insights into molecular mechanisms of sexual differences in salinity tolerance
Jiang, Journal of experimental botany 2012 - “...substances 1.46 1.68 eugene3.01470017 AT4G31480 F3L17.50; binding, clathrin binding, structural molecule activity 1.18 1.08 estExt_fgenesh4_pm.C_LG_I1158 AT5G55940 EMB2731; molecular function unknown 3.85 3.27 gw1.VII.1749.1 AT4G39970 T5J17.140; catalytic activity, hydrolase activity 2.3 1.25 estExt_fgenesh4_pm.C_LG_VI0047 AT4G16480 INT4; carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity 1.01 1.08...”
- Modulation of the light-harvesting chlorophyll antenna size in Chlamydomonas reinhardtii by TLA1 gene over-expression and RNA interference
Mitra, Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2012 - “...a lipid. Interestingly, the TLA1 homologue in Arabidopsis (AT5G55940) was predicted to be localized in the endoplasmic reticulum (ER) [61]. For many years, all...”
XP_001697758 predicted protein from Chlamydomonas reinhardtii
Aligns to 4:200 / 213 (92.5%), covers 98.4% of PF03665, 180.8 bits
NP_001135760 ER membrane protein complex subunit 8 isoform 2 from Homo sapiens
Aligns to 3:126 / 126 (98.4%), covers 58.6% of PF03665, 150.1 bits
CNAG_03380 hypothetical protein from Cryptococcus neoformans var. grubii H99
Aligns to 5:199 / 208 (93.8%), covers 98.4% of PF03665, 119.0 bits
- Antifungal Mechanism of Action of Lauryl Betaine Against Skin-Associated Fungus Malassezia restricta
Do, Mycobiology 2019 - “...dehydrogenase CNAG_03325 ChAPs family protein CNAG_03333 Cytoplasmic protein CNAG_03348 Hypothetical protein CNAG_03370 Calcium-binding protein NCS-1 CNAG_03380 Hypothetical protein CNAG_03528 AP-2 complex subunit alpha CNAG_04174 PEX6 Peroxin-6 CNAG_04388 SOD2 Mitochondrial manganese superoxide dismutase CNAG_04450 Chromodomain-helicase-DNA-binding protein 1 CNAG_04678 YPK1 Protein kinase CNAG_04751 Hypothetical protein CNAG_04804 SRE1 Sterol...”
AT5G51620 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 1:66 / 68 (97.1%), covers 19.9% of PF03665, 31.2 bits
E6N8B9 26S proteasome regulatory subunit N11-like protein from Caldiarchaeum subterraneum
Aligns to 2:145 / 202 (71.3%), covers 62.8% of PF03665, 30.0 bits
Or search for genetic data about PF03665 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory