PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04028 (DUF374)

PF04028.13 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

CJJ81176_0482 hypothetical protein (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 65:133 / 216 (31.9%), covers 98.6% of PF04028, 95.2 bits

WS1775 LIPOPROTEIN (NCBI) from Wolinella succinogenes DSM 1740
Aligns to 55:123 / 200 (34.5%), covers 95.7% of PF04028, 93.5 bits

CCNA_00306 hypothetical protein (RefSeq) from Caulobacter crescentus NA1000
Aligns to 71:146 / 237 (32.1%), covers 94.2% of PF04028, 91.2 bits

HP0270 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 7:75 / 162 (42.6%), covers 95.7% of PF04028, 90.1 bits

LIC12382 conserved hypothetical protein (NCBI) from Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Aligns to 76:144 / 238 (29.0%), covers 98.6% of PF04028, 89.9 bits

Q9ZMG5 lauroyl-Kdo2-lipid IVA myristoyltransferase (EC 2.3.1.243) from Helicobacter pylori (see paper)
jhp0255 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 62:130 / 217 (31.8%), covers 95.7% of PF04028, 89.3 bits

HPYLSS1_00259 DUF374 domain-containing protein from Helicobacter pylori SS1
Aligns to 62:130 / 217 (31.8%), covers 95.7% of PF04028, 89.3 bits

RPA0062 conserved unknown protein (NCBI) from Rhodopseudomonas palustris CGA009
Aligns to 63:131 / 224 (30.8%), covers 97.1% of PF04028, 85.6 bits

A1C_00645 hypothetical protein (RefSeq) from Rickettsia akari str. Hartford
Aligns to 70:138 / 218 (31.7%), covers 92.8% of PF04028, 78.1 bits

RBEMOGI_1439 DUF374 domain-containing protein from Rickettsia bellii str. RML Mogi
Aligns to 70:138 / 218 (31.7%), covers 91.3% of PF04028, 76.2 bits

RT0047 conserved hypothetical protein (NCBI) from Rickettsia typhi str. wilmington
Aligns to 70:138 / 218 (31.7%), covers 95.7% of PF04028, 75.7 bits

A1G_00705 hypothetical protein (RefSeq) from Rickettsia rickettsii str. 'Sheila Smith'
Aligns to 70:138 / 218 (31.7%), covers 92.8% of PF04028, 75.2 bits

JS55_00590 DUF374 domain-containing protein from Rickettsia felis str. LSU
Aligns to 70:138 / 218 (31.7%), covers 92.8% of PF04028, 75.2 bits

H375_5410 DUF374 domain-containing protein from Rickettsia prowazekii str. Breinl
Aligns to 70:138 / 218 (31.7%), covers 95.7% of PF04028, 74.5 bits

BMEII1030 putative lipoprotein (NCBI ptt file) from Brucella melitensis 16M
Aligns to 79:155 / 247 (31.2%), covers 95.7% of PF04028, 66.8 bits

Or search for genetic data about PF04028 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory