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Family Search for PF04239 (DUF421)

PF04239.12 hits 14 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

O31533 UPF0702 transmembrane protein YetF from Bacillus subtilis (strain 168)
BSU07140 hypothetical protein (RefSeq) from Bacillus subtilis subsp. subtilis str. 168
Aligns to 88:206 / 231 (51.5%), covers 98.1% of PF04239, 121.4 bits

CD1789 hypothetical protein (RefSeq) from Clostridium difficile 630
Aligns to 85:197 / 219 (51.6%), covers 97.2% of PF04239, 119.5 bits

BAS4309 conserved hypothetical protein (NCBI) from Bacillus anthracis str. Sterne
Aligns to 87:195 / 215 (50.7%), covers 97.2% of PF04239, 119.0 bits

CPR_1348 hypothetical protein (NCBI) from Clostridium perfringens SM101
Aligns to 85:203 / 232 (51.3%), covers 97.2% of PF04239, 115.0 bits

SM12261_0438 DUF421 domain-containing protein from Streptococcus mitis NCTC 12261
Aligns to 89:192 / 211 (49.3%), covers 98.1% of PF04239, 105.9 bits

LACR_2411 Predicted membrane protein (NCBI) from Lactococcus lactis subsp. cremoris SK11
Aligns to 88:191 / 211 (49.3%), covers 98.1% of PF04239, 104.2 bits

Ddes_1374 protein of unknown function DUF421 (RefSeq) from Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Aligns to 96:199 / 248 (41.9%), covers 98.1% of PF04239, 86.3 bits

ECs0989 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 103:192 / 230 (39.1%), covers 62.0% of PF04239, 57.5 bits

YcaP / b0906 DUF421 domain-containing protein YcaP from Escherichia coli K-12 substr. MG1655
b0906 conserved inner membrane protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 103:191 / 230 (38.7%), covers 62.0% of PF04239, 57.3 bits

c1044 Hypothetical protein ycaP (NCBI ptt file) from Escherichia coli CFT073
EC958_1062 DUF421 domain-containing protein from Escherichia coli O25b:H4-ST131
Aligns to 103:191 / 230 (38.7%), covers 62.0% of PF04239, 57.3 bits

KP1_2896 hypothetical protein (RefSeq) from Klebsiella pneumoniae NTUH-K2044
Aligns to 84:148 / 148 (43.9%), covers 58.3% of PF04239, 56.1 bits

MSMEG_1844 hypothetical protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 102:168 / 174 (38.5%), covers 56.5% of PF04239, 48.2 bits

MSMEG_4414 hypothetical protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 98:171 / 179 (41.3%), covers 58.3% of PF04239, 42.2 bits

BPSS2213 putative membrane protein (NCBI) from Burkholderia pseudomallei K96243
Aligns to 103:167 / 167 (38.9%), covers 57.4% of PF04239, 32.4 bits

Or search for genetic data about PF04239 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory