Family Search for PF04301 (BioG)

PF04301 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NMB0473 hypothetical protein from Neisseria meningitidis MC58
Aligns to 1:212 / 215 (98.6%), covers 100.0% of PF04301, 457.2 bits

• The majority of genes in the pathogenic Neisseria species are present in non-pathogenic Neisseria lactamica, including those designated as 'virulence genes'
  Snyder, BMC genomics 2006
  • “...Neisseria macacae, Neisseria sicca, Neisseria subflava NMB0435 Neisseria flavescens, Neisseria macacae, Neisseria sicca, Neisseria subflava NMB0473 Neisseria flavescens NMB0474 Neisseria flavescens NMB0486* Neisseria sicca NMB0654 Neisseria polysaccharea, Neisseria sicca NMB1400 Neisseria mucosa IS30 Neisseria elongata, Neisseria macacae, Neisseria sicca, Neisseria subflava * 100% identical sequences are...”

NGO1482 hypothetical protein from Neisseria gonorrhoeae FA 1090
Aligns to 1:212 / 215 (98.6%), covers 100.0% of PF04301, 442.7 bits

• The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation
  Das, Acta crystallographica. Section F, Structural biology and crystallization communications 2010
  • “...membrane protein involved in sulfur oxidation), NGO1198 (PF00884, sulfatase), NGO2105 (putative adhesion penetration protein) and NGO1482 (unknown function DUF452; PF04301). Functional studies with NGO1944 based on DNA microarrays suggest that NGO1944, NGO1945, NGO1946, NGO1947 and NGO1948 may be cotranscribed and involved in the regulation of msrAB...”

bioG / P44251 pimeloyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see 5 papers)
P44251 pimelyl-[acyl-carrier protein] methyl ester esterase (EC 3.1.1.85) from Haemophilus influenzae (see paper)
HI1552 H. influenzae predicted coding region HI1552 from Haemophilus influenzae Rd KW20
Aligns to 1:212 / 215 (98.6%), covers 100.0% of PF04301, 416.9 bits

• Natural genetic exchange between Haemophilus and Neisseria: intergeneric transfer of chromosomal genes between major human pathogens
  Kroll, Proceedings of the National Academy of Sciences of the United States of America 1998
  • “...the putative Haemophilus bio genes and a further unidentified ORF (HI1552) (Fig. 4). In this case, in contrast to the example of sodC, the same high degree of...”

APL_0940 hypothetical protein from Actinobacillus pleuropneumoniae L20
Aligns to 1:216 / 219 (98.6%), covers 99.5% of PF04301, 268.0 bits

• Effects of growth conditions on biofilm formation by Actinobacillus pleuropneumoniae
  Labrie, Veterinary research 2010
  • “...APL_1729 APL_1729 Hypothetical protein 1.401 APL_1062 APL_1062 Hypothetical protein 1.468 APL_0179 APL_0179 Hypothetical protein 1.481 APL_0940 APL_0940 Hypothetical protein 1.482 APL_1273 APL_1273 Putative fimbrial biogenesis and twitching motility protein PilF-like protein 1.488 APL_1131 APL_1131 Hypothetical protein 1.540 APL_0583 APL_0583 Hypothetical protein 1.585 APL_1096 APL_1096 Hypothetical protein...”

PG1618 conserved hypothetical protein from Porphyromonas gingivalis W83
Aligns to 1:226 / 228 (99.1%), covers 95.8% of PF04301, 194.3 bits

• The Porphyromonas gingivalis Hybrid Cluster Protein Hcp Is Required for Growth with Nitrite and Survival with Host Cells
  Belvin, Infection and immunity 2019
  • “...groES PG1811 PG2043 grpE DnaK PyrH PG0659 clpB PG1778 PG1618 PG1649 PG0975 PG0747 aroA aFld, bP fold change of transcript between conditions (with and without...”

Cj0305c hypothetical protein Cj0305c from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 1:203 / 203 (100.0%), covers 95.8% of PF04301, 85.4 bits

• Genomic diversity in Campylobacter jejuni: identification of C. jejuni 81-176-specific genes
  Poly, Journal of clinical microbiology 2005
  • “...protein Cj0741, C. jejuni NCTC 11168 (NP_281913) Hypothetical protein Cj0305c, C. jejuni NCTC 11168 (AL139074) 989 Identity (%)c hit hit hit hit hit hit hit hit...”

G157_07140 pimeloyl-ACP methyl esterase BioG family protein from Campylobacter coli CVM N29710
Aligns to 2:203 / 203 (99.5%), covers 96.2% of PF04301, 80.0 bits

• Proteomic Examination for Gluconeogenesis Pathway-Shift during Polyhydroxyalkanoate Formation in Cupriavidus necator Grown on Glycerol
  Tanadchangsaeng, Bioengineering (Basel, Switzerland) 2020
  • “...(Vibrio mimicus) gi|445940548 Unknown 18 HrpA protein (Neisseria gonorrhoeae NCCP11945) gi|194099492 Unknown 19 hypothetical protein G157_07140 (Campylobacter coli CVM N29710) gi|543941344 Unknown 20 flagellar scaffolding protein FlgD (Loktanella vestfoldensis) gi|494388140 Unknown 21 hypothetical protein (Candidatus Regiella insecticola) gi|493755517 Unknown...”

CJJ81176_0327 hypothetical protein from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 2:203 / 203 (99.5%), covers 96.2% of PF04301, 78.0 bits

• FliW controls growth-phase expression of Campylobacter jejuni flagellar and non-flagellar proteins via the post-transcriptional regulator CsrA
  Li, Microbiology (Reading, England) 2018 (secret)

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