PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04341 (DUF485)

PF04341 hits 27 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AZOBR_RS02935 small component of pyruvate transporter (yjcH-like) from Azospirillum brasilense Sp245
Aligns to 9:97 / 100 (89.0%), covers 98.9% of PF04341, 125.6 bits

PFLU1813 hypothetical protein from Pseudomonas fluorescens SBW25
Aligns to 10:99 / 103 (87.4%), covers 98.9% of PF04341, 121.9 bits

PS417_08860 small component of pyruvate transporter (yjcH-like) from Pseudomonas simiae WCS417
Aligns to 10:99 / 103 (87.4%), covers 98.9% of PF04341, 121.6 bits

Cp1002B_2057 DUF485 domain-containing protein from Corynebacterium pseudotuberculosis
Aligns to 22:109 / 113 (77.9%), covers 97.8% of PF04341, 119.5 bits

D9Q971 DUF485 domain-containing protein from Corynebacterium pseudotuberculosis (strain C231)
Aligns to 22:109 / 113 (77.9%), covers 97.8% of PF04341, 119.5 bits

PP1742 conserved hypothetical protein from Pseudomonas putida KT2440
Aligns to 10:99 / 103 (87.4%), covers 98.9% of PF04341, 118.7 bits

Pf1N1B4_3672 small component of pyruvate transporter (yjcH-like) from Pseudomonas fluorescens FW300-N1B4
Aligns to 10:99 / 103 (87.4%), covers 98.9% of PF04341, 118.1 bits

Pf6N2E2_5848 small component of pyruvate transporter (yjcH-like) from Pseudomonas fluorescens FW300-N2E2
Aligns to 10:99 / 103 (87.4%), covers 98.9% of PF04341, 114.9 bits

blr4114 blr4114 from Bradyrhizobium japonicum USDA 110
Aligns to 8:96 / 100 (89.0%), covers 98.9% of PF04341, 114.6 bits

PA3235 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 10:99 / 103 (87.4%), covers 97.8% of PF04341, 113.3 bits

y0509 hypothetical protein from Yersinia pestis KIM
Aligns to 10:99 / 103 (87.4%), covers 97.8% of PF04341, 113.0 bits

cg0952 putative integral membrane protein from Corynebacterium glutamicum ATCC 13032
Aligns to 22:109 / 113 (77.9%), covers 100.0% of PF04341, 112.6 bits

NBC2815_03739 DUF485 domain-containing protein from Xanthomonas fragariae
Aligns to 13:101 / 105 (84.8%), covers 98.9% of PF04341, 111.6 bits

STM4274 putative inner membrane protein from Salmonella typhimurium LT2
Aligns to 10:99 / 104 (86.5%), covers 97.8% of PF04341, 110.5 bits

t4180 putative membrane protein from Salmonella enterica subsp. enterica serovar Typhi Ty2
STY4472 putative membrane protein from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Aligns to 10:99 / 104 (86.5%), covers 97.8% of PF04341, 110.5 bits

SCO1823 integral membrane protein from Streptomyces coelicolor A3(2)
Aligns to 31:118 / 124 (71.0%), covers 98.9% of PF04341, 110.2 bits

ECs5050 hypothetical protein from Escherichia coli O157:H7 str. Sakai
ECs_5050 inner membrane protein from Escherichia coli O157:H7 str. Sakai
UTI89_C4658 hypothetical protein YjcH from Escherichia coli UTI89
Aligns to 10:99 / 104 (86.5%), covers 97.8% of PF04341, 109.7 bits

b4068 required for glycolate transport, with actP from Escherichia coli BW25113
YjcH / b4068 DUF485 domain-containing inner membrane protein YjcH from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b4068 conserved inner membrane protein involved in acetate transport from Escherichia coli str. K-12 substr. MG1655
Aligns to 10:99 / 104 (86.5%), covers 97.8% of PF04341, 109.7 bits

PP_3273 conserved hypothetical protein from Pseudomonas putida KT2440
Aligns to 10:98 / 102 (87.3%), covers 97.8% of PF04341, 108.3 bits

A1S_3301 hypothetical protein from Acinetobacter baumannii ATCC 17978
ACX60_RS00945, DJ41_3173 DUF485 domain-containing protein from Acinetobacter baumannii
Aligns to 10:98 / 110 (80.9%), covers 96.6% of PF04341, 102.7 bits

GSU2353 conserved hypothetical protein from Geobacter sulfurreducens PCA
Aligns to 12:99 / 102 (86.3%), covers 97.8% of PF04341, 93.9 bits

PD1295 conserved hypothetical protein from Xylella fastidiosa Temecula1
Aligns to 14:102 / 106 (84.0%), covers 98.9% of PF04341, 90.2 bits

PP_2796 conserved hypothetical protein from Pseudomonas putida KT2440
Aligns to 10:99 / 107 (84.1%), covers 97.8% of PF04341, 88.6 bits

PCLA_07r0386, WP_074983811 DUF485 domain-containing protein from Pseudomonas citronellolis
Aligns to 16:105 / 109 (82.6%), covers 97.8% of PF04341, 87.9 bits

DBX28_14830 DUF485 domain-containing protein from Pseudomonas aeruginosa
Aligns to 10:99 / 107 (84.1%), covers 97.8% of PF04341, 86.5 bits

BAS1517 conserved hypothetical protein from Bacillus anthracis str. Sterne
Aligns to 21:106 / 113 (76.1%), covers 97.8% of PF04341, 86.2 bits

RHA1_ro02848 hypothetical protein from Rhodococcus sp. RHA1
Aligns to 11:94 / 97 (86.6%), covers 92.1% of PF04341, 46.2 bits

Or search for genetic data about PF04341 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory