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Family Search for PF04343 (DUF488)

PF04343.13 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Sca_2018 hypothetical protein (RefSeq) from Staphylococcus carnosus subsp. carnosus TM300
SCA_2018 DUF488 family protein from Staphylococcus carnosus subsp. carnosus TM300
Aligns to 4:117 / 123 (92.7%), covers 100.0% of PF04343, 117.9 bits

BBMN68_520 DUF488 domain-containing protein from Bifidobacterium longum subsp. longum BBMN68
Aligns to 4:112 / 113 (96.5%), covers 99.2% of PF04343, 115.5 bits

BAB2_0759 Protein of unknown function DUF488 (NCBI) from Brucella melitensis biovar Abortus 2308
Q8YBU9 Putative uroporphyrin-iii c-methyltransferase from Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Aligns to 5:113 / 116 (94.0%), covers 99.2% of PF04343, 114.0 bits

SA0230 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
SAOUHSC_00202 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus NCTC 8325
SAUSA300_0232 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
NWMN_0174 hypothetical protein (RefSeq) from Staphylococcus aureus subsp. aureus str. Newman
SACOL0218 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus COL
USA300HOU_RS01225 DUF488 domain-containing protein from Staphylococcus aureus subsp. aureus USA300_TCH1516
Aligns to 4:116 / 118 (95.8%), covers 99.2% of PF04343, 110.5 bits

BCAM2139 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 14:139 / 186 (67.7%), covers 99.2% of PF04343, 110.3 bits

NE2305 conserved hypothetical protein (NCBI ptt file) from Nitrosomonas europaea ATCC 19718
Aligns to 14:139 / 182 (69.2%), covers 99.2% of PF04343, 110.3 bits

c2197 hypothetical protein (RefSeq) from Escherichia coli CFT073
Aligns to 4:112 / 115 (94.8%), covers 99.2% of PF04343, 110.0 bits

YeaO / b1792 DUF488 domain-containing protein YeaO from Escherichia coli K-12 substr. MG1655
yeaO / RF|NP_416306 uncharacterized protein yeaO from Escherichia coli K12 (see paper)
b1792 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 4:112 / 115 (94.8%), covers 99.2% of PF04343, 109.2 bits

SC1288 putative cytoplasmic protein (NCBI) from Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
STM1277 putative cytoplasmic protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 4:112 / 115 (94.8%), covers 99.2% of PF04343, 107.3 bits

pRL80098 hypothetical protein (NCBI) from Rhizobium leguminosarum bv. viciae 3841
Aligns to 13:133 / 162 (74.7%), covers 98.4% of PF04343, 106.6 bits

PA1065 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 28:136 / 157 (69.4%), covers 99.2% of PF04343, 103.8 bits

XC_2584 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 36:158 / 205 (60.0%), covers 99.2% of PF04343, 102.4 bits

SiRe_0629 DUF488 domain-containing protein from Sulfolobus islandicus REY15A
Aligns to 3:108 / 115 (92.2%), covers 100.0% of PF04343, 93.1 bits

Rv3073c hypothetical protein (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 8:115 / 118 (91.5%), covers 99.2% of PF04343, 89.6 bits

CD630DERM_36140 DUF488 domain-containing protein from Clostridioides difficile
CD3614 hypothetical protein (RefSeq) from Clostridium difficile 630
Aligns to 12:131 / 205 (58.5%), covers 95.9% of PF04343, 72.0 bits

Saci_2166 hypothetical protein (NCBI) from Sulfolobus acidocaldarius DSM 639
Aligns to 3:108 / 116 (91.4%), covers 100.0% of PF04343, 68.6 bits

Synpcc7942_0758 hypothetical protein (NCBI) from Synechococcus elongatus PCC 7942
Aligns to 22:128 / 140 (76.4%), covers 96.7% of PF04343, 60.0 bits

D1832_RS13660, WP_118914870 DUF488 domain-containing protein from Dermacoccus abyssi
Aligns to 13:147 / 163 (82.8%), covers 97.5% of PF04343, 53.8 bits

Or search for genetic data about PF04343 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory