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Family Search for PF04359 (DUF493)

PF04359.14 hits 20 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BCAL0706 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 19:102 / 102 (82.4%), covers 100.0% of PF04359, 111.7 bits

NGO0791 hypothetical protein (NCBI) from Neisseria gonorrhoeae FA 1090
Aligns to 8:91 / 91 (92.3%), covers 98.8% of PF04359, 107.5 bits

y1174 hypothetical protein (NCBI ptt file) from Yersinia pestis KIM
YPTB1093 hypothetical protein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 6:87 / 87 (94.3%), covers 98.8% of PF04359, 106.5 bits

NMB1218 hypothetical protein (NCBI) from Neisseria meningitidis MC58
Aligns to 8:91 / 91 (92.3%), covers 98.8% of PF04359, 106.3 bits

Ent638_1166 hypothetical protein (RefSeq) from Enterobacter sp. 638
Aligns to 6:87 / 87 (94.3%), covers 98.8% of PF04359, 102.0 bits

YbeD / b0631 DUF493 domain-containing protein YbeD from Escherichia coli K-12 substr. MG1655 (see 4 papers)
ybeD / PDB|1RWU UPF0250 protein ybeD from Escherichia coli K12 (see paper)
NP_415164 DUF493 domain-containing protein YbeD from Escherichia coli str. K-12 substr. MG1655
b0631 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
c0721 Hypothetical protein ybeD (NCBI ptt file) from Escherichia coli CFT073
ECs0669 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
W8ZNL1 UPF0250 protein YbeD from Escherichia coli O25b:H4-ST131
Aligns to 6:87 / 87 (94.3%), covers 98.8% of PF04359, 99.9 bits

STM14_0743 YbeD family protein from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
STM0636 putative cytoplasmic protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 6:87 / 87 (94.3%), covers 98.8% of PF04359, 99.5 bits

KPN_00663 hypothetical protein (RefSeq) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Aligns to 6:87 / 87 (94.3%), covers 98.8% of PF04359, 99.3 bits

VF_0744 YbeD family protein from Aliivibrio fischeri ES114
VF_0744 hypothetical protein (RefSeq) from Vibrio fischeri ES114
Aligns to 8:89 / 89 (92.1%), covers 98.8% of PF04359, 99.1 bits

PA3998 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 9:93 / 93 (91.4%), covers 98.8% of PF04359, 98.7 bits

SO1163 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 7:88 / 88 (93.2%), covers 98.8% of PF04359, 97.6 bits

FTN_0908 hypothetical protein (NCBI) from Francisella tularensis subsp. novicida U112
FTS_1033 DUF493 domain-containing protein from Francisella tularensis subsp. holarctica FSC200
Aligns to 11:94 / 94 (89.4%), covers 98.8% of PF04359, 89.3 bits

FTT_1030 hypothetical protein (RefSeq) from Francisella tularensis subsp. tularensis SCHU S4
Aligns to 11:94 / 94 (89.4%), covers 98.8% of PF04359, 89.0 bits

A1S_2705 hypothetical protein (RefSeq) from Acinetobacter baumannii ATCC 17978
Aligns to 12:95 / 95 (88.4%), covers 98.8% of PF04359, 85.5 bits

XC_0711 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 9:92 / 92 (91.3%), covers 97.6% of PF04359, 69.7 bits

PFLU5418 hypothetical protein (RefSeq) from Pseudomonas fluorescens SBW25
Aligns to 8:91 / 91 (92.3%), covers 98.8% of PF04359, 69.1 bits

AT1G27385 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 116:201 / 254 (33.9%), covers 97.6% of PF04359, 65.6 bits

B739_1916 DUF493 domain-containing protein from Riemerella anatipestifer RA-CH-1
Aligns to 22:99 / 99 (78.8%), covers 95.2% of PF04359, 49.6 bits

HP_0495 DUF493 domain-containing protein from Helicobacter pylori 26695
HP0495 hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 7:86 / 86 (93.0%), covers 97.6% of PF04359, 41.4 bits

Cj0253 hypothetical protein Cj0253 (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 10:87 / 87 (89.7%), covers 91.7% of PF04359, 38.8 bits

Or search for genetic data about PF04359 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory