Family Search for PF04361 (DUF494)

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PF04361 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

U876_22580 DUF494 family protein from Aeromonas hydrophila NJ-35
Aligns to 1:157 / 157 (100.0%), covers 100.0% of PF04361, 208.4 bits

• Identification and Characterization of an Aeromonas hydrophila Oligopeptidase Gene pepF Negatively Related to Biofilm Formation
  Du, Frontiers in microbiology 2016
  • “...aconitate hydratase Function unknown TM28 U876_00770 359/527 Hypothetical protein TM29 U876_00295 583/1625 Hypothetical protein TM88 U876_22580 340/659 Uncharacterized conserved protein Smg TM426 U876_15405 115/301 Hypothetical protein Enhanced-biofilm mutants Structure TM4 U876_21860 1347/3722 MSHA biogenesis protein MshQ TM429 U876_21170 126/323 Fimbrial protein TM789 U876_00340 858/1190 Membrane protein...”

swp_0060 hypothetical protein from Shewanella piezotolerans WP3
Aligns to 1:156 / 157 (99.4%), covers 100.0% of PF04361, 202.2 bits

• Condition-Specific Molecular Network Analysis Revealed That Flagellar Proteins Are Involved in Electron Transfer Processes of Shewanella piezotolerans WP3
  Ding, Genetics research 2021
  • “...0.67 1.01 E 02 swp_0679, swp_4217, swp_0678, swp_2705 5 4 0.67 1.01 E 02 swp_0059, swp_0060, swp_0056, swp_1586 6 5 0.50 1.42 E 02 swp_4653, swp_4654, swp_4652, swp_4657, swp_4655 7 7 0.52 2.19 E 02 swp_2623, swp_2495, swp_4933, swp_4301, swp_4936, swp_4935, swp_4940 8 4 0.50 2.89...”

Smg / b3284 DUF494 domain-containing protein Smg from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b3284 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:157 / 157 (100.0%), covers 100.0% of PF04361, 199.3 bits

• Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate
  Pomposiello, Journal of bacteriology 2001
  • “...b3601 b0578 b1482 b4376 b1897 b0932 b0903 b1014 b3506 b3284 b3908 b2703 aceB acnA adhE ais artP b0485 b0881 b1112 b1164 b1165 b1200 b1450 b1452 b1643 b1795...”

ECs4150 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 1:157 / 157 (100.0%), covers 100.0% of PF04361, 199.2 bits

• Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium
  Bergholz, BMC microbiology 2007
  • “...rpsI -2.28 1 ECs4929 purH -4.14 1 ECs4132 yhdG -2.54 1 ECs4931 metA -3.78 1 ECs4150 smg 2.24 2 ECs4932 aceB 5.35 2 ECs4156 mscL 2.01 2 ECs5004 O157 2.14 2 ECs4161 rpsD -2.17 1 ECs5046 yjcD -3.81 1 ECs4162 rpsK -2.36 1 ECs5051 acs 5.55...”

c4045 Protein smg from Escherichia coli CFT073
Aligns to 1:157 / 157 (100.0%), covers 100.0% of PF04361, 198.8 bits

• Abstracts of the 82nd Annual Meeting of the Japanese Cancer Association; 2023 September 21-23; Yokohama, Japan
  , Cancer science 2024
• Abstracts of the 79th Annual Meeting of the Japanese Cancer Association; 2020 Oct 1-3; Hiroshima, Japan as Cancer Science, Supplement 1, Vol 112 (2021)
  , Cancer science 2021

SG4035 hypothetical protein from Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Aligns to 1:157 / 157 (100.0%), covers 100.0% of PF04361, 196.6 bits

• Deg phenotype of Escherichia coli lon mutants
  Gottesman, Journal of bacteriology 1978
  • “...tsx+ ion-rl F- proC A(gal-att-bio) sup' str SG4033 SG4034 SG4035 SG4036 SG4405 SG4406 SG4407 SG4408 SG4409 pro' lonA pro' ion-rl pro' ion-t2 pro' capR6 F' 13...”

A6TET8 Protein Smg from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Aligns to 1:152 / 152 (100.0%), covers 96.7% of PF04361, 186.4 bits

• Iron Limitation in Klebsiella pneumoniae Defines New Roles for Lon Protease in Homeostasis and Degradation by Quantitative Proteomics
  Muselius, Frontiers in microbiology 2020
  • “...Sulfite reductase [NADPH] hemoprotein beta-component Novel 1.70 Enzymatic activity A6THT3 KPN_04771 Putative transposase Novel 3.87 A6TET8 smg Uncharacterized Novel 2.91 A6TF04 codA Putative cytosine deaminase Novel 2.87 A6T5N8 gsk Inosineguanosine kinase Connection 2.55 A6T9U4 ydcP Putative protease Connection 2.52 A6TFY4 KPN_04085 Putative glycoside hydrolase Novel 2.47...”

NMB0117 putative smg protein from Neisseria meningitidis MC58
Aligns to 1:148 / 153 (96.7%), covers 94.8% of PF04361, 124.7 bits

• DprA from Neisseria meningitidis: properties and role in natural competence for transformation
  Hovland, Microbiology (Reading, England) 2017
  • “...yielding the strains EH-MC58-001 and EH-MC58-003, respectively (Table S1). For the generation of an smg (NMB0117) null mutant, two PCR products from smg were generated with the primer pairs SF86/SF87 and SF88/SF89 and together with an aph cassette [ 37 ] ligated into pBluescript II SK(+),...”

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