PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04391 (DUF533)

PF04391.12 hits 25 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

PP_1487 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 40:221 / 226 (80.5%), covers 99.4% of PF04391, 227.1 bits

PA3712 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 40:223 / 231 (79.7%), covers 99.4% of PF04391, 223.3 bits

VC0873 conserved hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 35:211 / 214 (82.7%), covers 98.9% of PF04391, 215.3 bits

BB4284 putative membrane protein (NCBI) from Bordetella bronchiseptica RB50
Aligns to 39:222 / 226 (81.4%), covers 99.4% of PF04391, 205.3 bits

BP3218 putative membrane protein (NCBI) from Bordetella pertussis Tohama I
Aligns to 39:222 / 226 (81.4%), covers 99.4% of PF04391, 204.2 bits

A6W98_RS17070 tellurite resistance TerB family protein from Rhodovulum sulfidophilum DSM 1374
Aligns to 10:228 / 237 (92.4%), covers 97.8% of PF04391, 194.6 bits

BAB1_0893 Protein of unknown function DUF533 (NCBI) from Brucella melitensis biovar Abortus 2308
Aligns to 34:230 / 235 (83.8%), covers 98.3% of PF04391, 192.9 bits

SMc03152 HYPOTHETICAL TRANSMEMBRANE PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 34:227 / 234 (82.9%), covers 98.3% of PF04391, 188.1 bits

Avi_3814 hypothetical protein (RefSeq) from Agrobacterium vitis S4
Aligns to 34:224 / 234 (81.6%), covers 97.8% of PF04391, 187.7 bits

CH1034_240296 tellurite resistance TerB family protein from Klebsiella pneumoniae
Aligns to 27:210 / 219 (84.0%), covers 96.6% of PF04391, 169.1 bits

V0SC60 Uncharacterized protein from Escherichia coli 907672
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 167.4 bits

Q82V70 Uncharacterized protein from Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Aligns to 58:262 / 268 (76.5%), covers 95.0% of PF04391, 165.3 bits

YebE / b1846 DUF533 domain-containing inner membrane protein YebE from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P33218 Inner membrane protein YebE from Escherichia coli (strain K12)
b1846 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 164.2 bits

c2258 Hypothetical protein yebE (NCBI ptt file) from Escherichia coli CFT073
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 164.0 bits

GW13_PRO0298 tellurite resistance TerB family protein from Salmonella enterica subsp. enterica serovar Cerro
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 163.8 bits

SEEHRA37_07475 tellurite resistance TerB family protein from Salmonella enterica subsp. enterica serovar Heidelberg str. SARA37
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 163.7 bits

STM1880 putative inner membrane protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 162.3 bits

t0997 conserved hypothetical protein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi Ty2
Aligns to 29:210 / 219 (83.1%), covers 97.2% of PF04391, 160.4 bits

MHA_0531 tellurite resistance TerB family protein from Mannheimia haemolytica PHL213
Aligns to 34:207 / 209 (83.3%), covers 98.9% of PF04391, 160.0 bits

COI_1309 tellurite resistance TerB family protein from Mannheimia haemolytica serotype A2 str. OVINE
Aligns to 34:207 / 209 (83.3%), covers 98.9% of PF04391, 159.1 bits

Q9K182 Uncharacterized protein from Neisseria meningitidis serogroup B (strain MC58)
Aligns to 28:202 / 204 (85.8%), covers 98.9% of PF04391, 156.0 bits

Q5F657 3-hydroxyisobutyrate dehydrogenase from Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
NGO1709 hypothetical protein (NCBI) from Neisseria gonorrhoeae FA 1090
Aligns to 28:202 / 204 (85.8%), covers 98.9% of PF04391, 155.0 bits

APL_1609 hypothetical protein (NCBI) from Actinobacillus pleuropneumoniae L20
Aligns to 7:184 / 186 (95.7%), covers 92.2% of PF04391, 148.1 bits

RSP_1549 hypothetical protein (NCBI) from Rhodobacter sphaeroides 2.4.1
Aligns to 31:217 / 227 (82.4%), covers 97.8% of PF04391, 144.4 bits

slr1194 hypothetical protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 2:122 / 222 (54.5%), covers 59.8% of PF04391, 31.3 bits

Or search for genetic data about PF04391 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory