PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04430 (DUF498)

PF04430.14 hits 19 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BCAL1928 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 14:121 / 124 (87.1%), covers 100.0% of PF04430, 116.3 bits

NDUF3_MOUSE / Q9JKL4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3; Protein 2P1 from Mus musculus (Mouse) (see paper)
NP_075736 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 from Mus musculus
Aligns to 61:169 / 185 (58.9%), covers 100.0% of PF04430, 114.1 bits

TR70_0856 Xcc1710-like domain-containing protein from Burkholderia pseudomallei
Aligns to 26:133 / 136 (79.4%), covers 100.0% of PF04430, 113.6 bits

NDUF3_RAT / O08776 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3; Nuclear protein E3-3 from Rattus norvegicus (Rat) (see paper)
Aligns to 61:169 / 185 (58.9%), covers 100.0% of PF04430, 113.1 bits

NP_951056 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 isoform b from Homo sapiens
Aligns to 3:111 / 127 (85.8%), covers 100.0% of PF04430, 112.8 bits

NDUF3_HUMAN / Q9BU61 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 from Homo sapiens (Human) (see 2 papers)
Aligns to 60:168 / 184 (59.2%), covers 100.0% of PF04430, 111.4 bits

Q7VV99 Uncharacterized protein from Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Aligns to 14:145 / 150 (88.0%), covers 100.0% of PF04430, 108.0 bits

AT3G60150 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 56:164 / 170 (64.1%), covers 98.2% of PF04430, 105.6 bits

RL2056 hypothetical protein (NCBI) from Rhizobium leguminosarum bv. viciae 3841
Aligns to 18:126 / 128 (85.2%), covers 100.0% of PF04430, 101.6 bits

RPA2829 conserved hypothetical protein (NCBI) from Rhodopseudomonas palustris CGA009
Aligns to 16:124 / 127 (85.8%), covers 100.0% of PF04430, 95.9 bits

NP_001023328 NADH:Ubiquinone oxidoreductase Assembly Factor from Caenorhabditis elegans
Aligns to 72:183 / 270 (41.5%), covers 96.3% of PF04430, 90.7 bits

ECH_0516 hypothetical protein (NCBI) from Ehrlichia chaffeensis str. Arkansas
Aligns to 14:118 / 120 (87.5%), covers 100.0% of PF04430, 87.4 bits

XC_2521 hypothetical protein (NCBI) from Xanthomonas campestris pv. campestris str. 8004
Aligns to 15:121 / 124 (86.3%), covers 94.5% of PF04430, 84.8 bits

NGO_0780 Mth938-like domain-containing protein from Neisseria gonorrhoeae FA 1090
Aligns to 15:122 / 123 (87.8%), covers 97.2% of PF04430, 79.4 bits

FTN_0426 hypothetical protein (NCBI) from Francisella tularensis subsp. novicida U112
FTT_0900 hypothetical protein (RefSeq) from Francisella tularensis subsp. tularensis SCHU S4
Aligns to 15:123 / 123 (88.6%), covers 99.1% of PF04430, 79.2 bits

Q9JZ97 Uncharacterized protein from Neisseria meningitidis serogroup B (strain MC58)
Aligns to 23:130 / 131 (82.4%), covers 97.2% of PF04430, 78.5 bits

AAMDC_MOUSE / Q8R0P4 Mth938 domain-containing protein; LI2 from Mus musculus (Mouse) (see 2 papers)
Aligns to 6:119 / 122 (93.4%), covers 100.0% of PF04430, 75.1 bits

Q9H7C9 Mth938 domain-containing protein from Homo sapiens
Aligns to 6:119 / 122 (93.4%), covers 100.0% of PF04430, 74.4 bits

PAB1927 hypothetical protein (NCBI ptt file) from Pyrococcus abyssi GE5
Aligns to 3:115 / 118 (95.8%), covers 92.7% of PF04430, 36.9 bits

Or search for genetic data about PF04430 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory