PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF04526 (DUF568)

PF04526 hits 36 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

B9T494 Auxin-induced in root cultures protein 12, putative from Ricinus communis
Aligns to 89:188 / 237 (42.2%), covers 100.0% of PF04526, 104.7 bits

LOC107801843 cytochrome b561 and DOMON domain-containing protein At5g47530-like from Nicotiana tabacum
Aligns to 85:184 / 404 (24.8%), covers 100.0% of PF04526, 104.3 bits

B561H_ARATH / Q9LYS9 Cytochrome b561 and DOMON domain-containing protein At3g59070; Protein b561A.tha8 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT3G59070 auxin-responsive protein, putative (RefSeq) from Arabidopsis thaliana
Aligns to 98:198 / 466 (21.7%), covers 100.0% of PF04526, 100.0 bits

LOC102592722 cytochrome b561 and DOMON domain-containing protein At3g25290-like from Solanum tuberosum
Aligns to 90:189 / 392 (25.5%), covers 100.0% of PF04526, 98.1 bits

B561O_ARATH / Q9SV71 Cytochrome b561 and DOMON domain-containing protein At4g12980; Protein b561A.tha15 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT4G12980 auxin-responsive protein, putative (RefSeq) from Arabidopsis thaliana
Aligns to 90:195 / 394 (26.9%), covers 100.0% of PF04526, 97.0 bits

LOC4345306 cytochrome b561 and DOMON domain-containing protein At5g47530 from Oryza sativa Japonica Group
Aligns to 97:202 / 204 (52.0%), covers 100.0% of PF04526, 95.3 bits

LOC107276412 auxin-induced in root cultures protein 12 from Oryza sativa Japonica Group
Aligns to 93:197 / 263 (39.9%), covers 100.0% of PF04526, 92.6 bits

C5X4M5 DOMON domain-containing protein from Sorghum bicolor
Aligns to 98:200 / 265 (38.9%), covers 100.0% of PF04526, 92.4 bits

AIR12_ARATH / Q94BT2 Auxin-induced in root cultures protein 12 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
Aligns to 91:191 / 252 (40.1%), covers 100.0% of PF04526, 91.8 bits

LOC4346085 auxin-induced in root cultures protein 12 from Oryza sativa Japonica Group
Aligns to 90:193 / 263 (39.5%), covers 99.0% of PF04526, 91.6 bits

NP_566306 auxin-induced in root cultures-like protein from Arabidopsis thaliana
AT3G07390 AIR12; extracellular matrix structural constituent (RefSeq) from Arabidopsis thaliana
Aligns to 112:212 / 273 (37.0%), covers 100.0% of PF04526, 91.6 bits

B561J_ARATH / Q9FGK4 Cytochrome b561 and DOMON domain-containing protein At5g47530; Protein b561A.tha10 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT5G47530 Auxin-responsive family protein from Arabidopsis thaliana
Aligns to 88:187 / 395 (25.3%), covers 100.0% of PF04526, 91.6 bits

LOC4347483 cytochrome b561 and DOMON domain-containing protein At3g25290 from Oryza sativa Japonica Group
Aligns to 89:190 / 394 (25.9%), covers 100.0% of PF04526, 91.2 bits

B561C_ARATH / Q9LSE7 Cytochrome b561 and DOMON domain-containing protein At3g25290; Protein b561A.tha3 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT3G25290 auxin-responsive family protein (RefSeq) from Arabidopsis thaliana
Aligns to 89:195 / 393 (27.2%), covers 100.0% of PF04526, 90.5 bits

B561Q_ARATH / Q9FKC1 Cytochrome b561 and DOMON domain-containing protein At5g48750; Protein b561A.tha17 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Aligns to 95:195 / 255 (39.6%), covers 100.0% of PF04526, 89.4 bits

B561P_ARATH / Q9FKH6 Cytochrome b561 and DOMON domain-containing protein At5g35735; Protein b561A.tha16 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT5G35735 auxin-responsive family protein (RefSeq) from Arabidopsis thaliana
Aligns to 90:189 / 404 (24.8%), covers 100.0% of PF04526, 87.3 bits

C5YI64 DOMON domain-containing protein from Sorghum bicolor
Aligns to 86:189 / 258 (40.3%), covers 99.0% of PF04526, 86.5 bits

GRMZM2G427451 AIR12 precursor from Zea mays
Aligns to 88:189 / 258 (39.5%), covers 99.0% of PF04526, 85.3 bits

B651B_ARATH / Q8VYH6 Cytochrome b561 and DOMON domain-containing protein At4g17280; Protein b561A.tha2 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT4G17280 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 95:196 / 402 (25.4%), covers 100.0% of PF04526, 85.2 bits

Q9AR57 Cytochrome b561 and DOMON domain-containing protein from Solanum tuberosum
Aligns to 90:188 / 400 (24.8%), covers 100.0% of PF04526, 84.2 bits

C5HU39 AIR12 from Glycine max
NP_001237825 plasma membrane ascorbate-reducible b-type cytochrome family protein precursor from Glycine max
Aligns to 91:190 / 244 (41.0%), covers 97.0% of PF04526, 83.6 bits

GRMZM2G050159 uncharacterized protein LOC100281813 precursor from Zea mays
Aligns to 86:187 / 386 (26.4%), covers 100.0% of PF04526, 83.0 bits

B6SN55 AIR12 from Zea mays
Aligns to 88:189 / 258 (39.5%), covers 98.0% of PF04526, 81.6 bits

B6UBU0 AIR12 from Zea mays
Aligns to 99:203 / 274 (38.3%), covers 100.0% of PF04526, 81.6 bits

LOC4346084 cytochrome b561 and DOMON domain-containing protein At4g12980 from Oryza sativa Japonica Group
Aligns to 88:187 / 390 (25.6%), covers 100.0% of PF04526, 80.7 bits

XP_003534866 cytochrome b561 and DOMON domain-containing protein At5g47530 from Glycine max
Aligns to 95:193 / 404 (24.5%), covers 100.0% of PF04526, 80.4 bits

F2CZ96 Cytochrome b561 and DOMON domain-containing protein from Hordeum vulgare subsp. vulgare
Aligns to 88:186 / 384 (25.8%), covers 100.0% of PF04526, 80.2 bits

LOC4331929 cytochrome b561 and DOMON domain-containing protein At3g25290 from Oryza sativa Japonica Group
Aligns to 84:183 / 384 (26.0%), covers 100.0% of PF04526, 79.9 bits

GRMZM2G003506 uncharacterized protein LOC100285512 precursor from Zea mays
Aligns to 84:185 / 385 (26.5%), covers 100.0% of PF04526, 78.5 bits

LOC4331928 cytochrome b561 and DOMON domain-containing protein At5g35735 from Oryza sativa Japonica Group
Aligns to 87:191 / 193 (54.4%), covers 100.0% of PF04526, 77.4 bits

B6U5U8 Cytochrome b561 and DOMON domain-containing protein from Zea mays
Aligns to 84:185 / 387 (26.4%), covers 100.0% of PF04526, 76.3 bits

B561G_ARATH / Q9SJ74 Cytochrome b561 and DOMON domain-containing protein At2g04850; Protein b561A.tha7 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT2G04850 auxin-responsive protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 85:199 / 404 (28.5%), covers 99.0% of PF04526, 72.3 bits

K7VGM8 AIR12 from Zea mays
Aligns to 92:192 / 216 (46.8%), covers 100.0% of PF04526, 68.5 bits

GRMZM2G057467 AIR12 precursor from Zea mays
Aligns to 92:192 / 216 (46.8%), covers 100.0% of PF04526, 68.5 bits

LOC4331925 cytochrome b561 and DOMON domain-containing protein At2g04850 from Oryza sativa Japonica Group
Aligns to 100:212 / 417 (27.1%), covers 99.0% of PF04526, 61.0 bits

GRMZM2G331638 uncharacterized protein LOC100217044 precursor from Zea mays
Aligns to 91:203 / 408 (27.7%), covers 99.0% of PF04526, 60.2 bits

Or search for genetic data about PF04526 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory