PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05077 (DUF678)

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Running HMMer for PF05077

PF05077 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

DpV83gp120, YP_227495 hypothetical protein from Deerpox virus W-848-83
Aligns to 1:74 / 75 (98.7%), covers 100.0% of PF05077, 130.7 bits

NP_938366 111L from Yaba monkey tumor virus
Aligns to 1:73 / 74 (98.6%), covers 100.0% of PF05077, 120.2 bits

LSDV111 LSDV111 hypothetical protein from Lumpy skin disease virus NI-2490
Aligns to 1:73 / 74 (98.6%), covers 100.0% of PF05077, 118.1 bits

NP_659683 A19 family protein from Sheeppox virus
SPPV_106 hypothetical protein from Sheeppox virus
Aligns to 1:73 / 74 (98.6%), covers 100.0% of PF05077, 112.5 bits

SPV108 SPV108 hypothetical protein from Swinepox virus
NP_570268 SPV108 hypothetical protein from Swinepox virus
Aligns to 1:71 / 72 (98.6%), covers 100.0% of PF05077, 111.8 bits

P33842 Protein OPG146 from Variola virus (isolate Human/India/Ind3/1967)
Aligns to 1:75 / 76 (98.7%), covers 98.6% of PF05077, 111.7 bits

PG146_VACCW / P68714 Protein OPG146 from Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) (see 2 papers)
P20994 Protein OPG146 from Vaccinia virus (strain Copenhagen)
CPXV152 CPXV152 protein from Cowpox virus
VACWR139 hypothetical protein from Vaccinia virus
Aligns to 1:76 / 77 (98.7%), covers 95.9% of PF05077, 110.9 bits

FPV184 hypothetical protein from Fowlpox virus
NP_039147 ORF FPV184 from Fowlpox virus
Aligns to 2:86 / 88 (96.6%), covers 98.6% of PF05077, 102.0 bits

NP_957873 ORF096 hypothetical protein from Orf virus
Aligns to 19:89 / 90 (78.9%), covers 98.6% of PF05077, 94.6 bits

CNPV258 hypothetical protein from Canarypox virus
NP_955281 CNPV258 conserved hypothetical protein from Canarypox virus
Aligns to 4:87 / 89 (94.4%), covers 97.3% of PF05077, 81.3 bits

Or search for genetic data about PF05077 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory