PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05078 (DUF679)

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Running HMMer for PF05078

PF05078 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

DMP4_ARATH / Q8L928 Protein DMP4; AtDMP4 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT4G18425 hypothetical protein from Arabidopsis thaliana
Aligns to 46:208 / 213 (76.5%), covers 99.4% of PF05078, 234.5 bits

DMP6_ARATH / Q9FNL3 Protein DMP6; AtDMP6 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 47:209 / 214 (76.2%), covers 99.4% of PF05078, 232.6 bits

DMP3_ARATH / Q9STW3 Protein DMP3; AtDMP3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT4G24310 hypothetical protein from Arabidopsis thaliana
Aligns to 40:204 / 213 (77.5%), covers 99.4% of PF05078, 228.0 bits

DMP5_ARATH / Q9M897 Protein DMP5; AtDMP5 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT3G02430 hypothetical protein from Arabidopsis thaliana
Aligns to 46:210 / 219 (75.3%), covers 99.4% of PF05078, 224.8 bits

DMP7_ARATH / Q5XV67 Protein DMP7; AtDMP7 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 32:195 / 200 (82.0%), covers 98.8% of PF05078, 224.0 bits

XP_015895121 protein DMP9-like from Ziziphus jujuba
Aligns to 55:217 / 220 (74.1%), covers 99.4% of PF05078, 220.5 bits

A2YP92 Uncharacterized protein from Oryza sativa subsp. indica
Aligns to 43:211 / 224 (75.4%), covers 99.4% of PF05078, 214.0 bits

DMP9_ARATH / Q9FK96 Protein DMP9; AtDMP9; Protein DUO1-ACTIVATED UNKNOWN 2 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT5G39650 hypothetical protein from Arabidopsis thaliana
NP_198781 transmembrane protein, putative (DUF679) from Arabidopsis thaliana
Aligns to 67:241 / 244 (71.7%), covers 99.4% of PF05078, 213.8 bits

GRMZM5G812126 uncharacterized protein LOC100278708 from Zea mays
Aligns to 87:249 / 254 (64.2%), covers 99.4% of PF05078, 213.2 bits

DMP8_ARATH / O80493 Protein DMP8; AtDMP8 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT1G09157 hypothetical protein from Arabidopsis thaliana
NP_001031010 transmembrane protein, putative (DUF679) from Arabidopsis thaliana
Aligns to 66:240 / 243 (72.0%), covers 99.4% of PF05078, 212.0 bits

LOC4325227 protein DMP10 from Oryza sativa Japonica Group
Aligns to 74:242 / 264 (64.0%), covers 99.4% of PF05078, 208.6 bits

GRMZM2G465053 uncharacterized protein LOC100277972 from Zea mays
Aligns to 40:202 / 205 (79.5%), covers 99.4% of PF05078, 206.9 bits

DMP2_ARATH / Q9LVF1 Protein DMP2; AtDMP2 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT3G21550 hypothetical protein from Arabidopsis thaliana
Aligns to 14:171 / 184 (85.9%), covers 98.8% of PF05078, 206.7 bits

DMP1_ARATH / Q9LVF4 Protein DMP1; AtDMP1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
AT3G21520 hypothetical protein from Arabidopsis thaliana
NP_188789 transmembrane protein, putative (DUF679 domain membrane protein 1) from Arabidopsis thaliana
Aligns to 28:187 / 207 (77.3%), covers 98.8% of PF05078, 194.4 bits

DMP10_ARATH / Q3E912 Protein DMP10; AtDMP10 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 10:187 / 191 (93.2%), covers 98.8% of PF05078, 181.3 bits

AT4G28485 hypothetical protein from Arabidopsis thaliana
Aligns to 57:160 / 165 (63.0%), covers 60.7% of PF05078, 123.2 bits

Or search for genetic data about PF05078 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory