PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05542 (DUF760)

PF05542.11 hits 7 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

GRMZM2G044900 uncharacterized protein LOC100383346 from Zea mays
2 alignments in 69:373 / 390 (51.5%), covering up to 100.0% of PF05542, 168.1 bits

AT1G63610 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 88:325 / 340 (49.1%), covering up to 98.8% of PF05542, 134.9 bits

UVB31_ARATH / Q9LVJ0 UV-B-induced protein At3g17800, chloroplastic from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
AT3G17800 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 149:274 / 421 (29.9%), covers 100.0% of PF05542, 104.2 bits

slr1674 hypothetical protein (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 22:104 / 116 (71.6%), covers 97.6% of PF05542, 99.5 bits

PMM0605 conserved hypothetical protein (NCBI) from Prochlorococcus marinus sp. MED4
Aligns to 19:101 / 112 (74.1%), covers 100.0% of PF05542, 95.0 bits

sync_1524 hypothetical protein (NCBI) from Synechococcus sp. CC9311
Aligns to 22:104 / 120 (69.2%), covers 98.8% of PF05542, 88.8 bits

AT5G48590 hypothetical protein (RefSeq) from Arabidopsis thaliana
2 alignments in 112:325 / 344 (59.6%), covering up to 98.8% of PF05542, 88.6 bits

Or search for genetic data about PF05542 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory