PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05553 (DUF761)

PF05553.11 hits 24 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AT2G26110 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 270:305 / 309 (11.7%), covers 97.2% of PF05553, 63.7 bits

AT5G47920 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 150:185 / 187 (19.3%), covers 100.0% of PF05553, 61.2 bits

A70_ARATH / F4K956 Pathogen-associated molecular patterns-induced protein A70; PIG A70 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT5G56980 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 343:377 / 379 (9.2%), covers 97.2% of PF05553, 61.0 bits

LOC106389377 uncharacterized protein LOC106389377 from Brassica napus
Aligns to 339:373 / 375 (9.3%), covers 97.2% of PF05553, 60.7 bits

AT5G54300 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 287:322 / 326 (11.0%), covers 97.2% of PF05553, 59.7 bits

AT5G38700 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 146:179 / 182 (18.7%), covers 86.1% of PF05553, 57.6 bits

AT4G26130 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 250:284 / 286 (12.2%), covers 94.4% of PF05553, 56.5 bits

AT4G16790 hydroxyproline-rich glycoprotein family protein (RefSeq) from Arabidopsis thaliana
Aligns to 434:468 / 473 (7.4%), covers 88.9% of PF05553, 54.2 bits

AT1G61260 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 307:342 / 344 (10.5%), covers 100.0% of PF05553, 53.1 bits

AT4G02170 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 133:166 / 171 (19.9%), covers 83.3% of PF05553, 52.3 bits

AT5G06790 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 172:207 / 209 (17.2%), covers 97.2% of PF05553, 48.2 bits

AT4G14380 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 163:198 / 200 (18.0%), covers 94.4% of PF05553, 47.1 bits

AT5G57510 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 87:122 / 130 (27.7%), covers 88.9% of PF05553, 46.8 bits

AT4G04990 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 264:295 / 303 (10.6%), covers 83.3% of PF05553, 45.8 bits

LOC101293711 uncharacterized protein LOC101293711 from Fragaria vesca subsp. vesca
Aligns to 182:212 / 219 (14.2%), covers 77.8% of PF05553, 41.1 bits

AT3G60380 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 700:729 / 743 (4.0%), covers 69.4% of PF05553, 40.4 bits

AT5G13880 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 151:179 / 188 (15.4%), covers 77.8% of PF05553, 37.6 bits

AT5G61710 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 117:149 / 155 (21.3%), covers 86.1% of PF05553, 36.7 bits

AT1G72790 hydroxyproline-rich glycoprotein family protein (RefSeq) from Arabidopsis thaliana
Aligns to 507:538 / 561 (5.7%), covers 77.8% of PF05553, 36.7 bits

AT4G29110 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 162:187 / 200 (13.0%), covers 61.1% of PF05553, 34.8 bits

LOC101762337 uncharacterized protein LOC101762337 from Setaria italica
Aligns to 174:195 / 204 (10.8%), covers 55.6% of PF05553, 28.4 bits

AT4G32860 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 172:197 / 199 (13.1%), covers 55.6% of PF05553, 28.2 bits

LOC101510669 uncharacterized protein LOC101510669 from Cicer arietinum
Aligns to 217:253 / 253 (14.6%), covers 91.7% of PF05553, 28.0 bits

AT1G52140 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 180:206 / 208 (13.0%), covers 63.9% of PF05553, 27.1 bits

Or search for genetic data about PF05553 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory