PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF05656 (DUF805)

PF05656 hits 33 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YhaH / b3103 putative inner membrane protein from Escherichia coli K-12 substr. MG1655 (see paper)
b3103 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 11:117 / 121 (88.4%), covers 100.0% of PF05656, 128.1 bits

STM3234 putative inner membrane protein from Salmonella typhimurium LT2
Aligns to 11:117 / 121 (88.4%), covers 100.0% of PF05656, 125.6 bits

PA0563 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 12:113 / 117 (87.2%), covers 100.0% of PF05656, 120.6 bits

YhaI / b3104 putative inner membrane protein from Escherichia coli K-12 substr. MG1655 (see paper)
Z4458 putative cytochrome from Escherichia coli O157:H7 EDL933
b3104 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 11:113 / 118 (87.3%), covers 100.0% of PF05656, 118.1 bits

PMI1438 hypothetical protein from Proteus mirabilis HI4320
Aligns to 12:125 / 127 (89.8%), covers 100.0% of PF05656, 117.0 bits

plu2346 No description from Photorhabdus luminescens subsp. laumondii TTO1
Aligns to 11:118 / 122 (88.5%), covers 99.1% of PF05656, 110.6 bits

BC2001 Integral membrane protein from Bacillus cereus ATCC 14579
Aligns to 11:112 / 120 (85.0%), covers 100.0% of PF05656, 104.7 bits

LMRG_00360 hypothetical protein from Listeria monocytogenes 10403S
lmo0672 similar to unknown protein from Listeria monocytogenes EGD-e
Aligns to 14:135 / 142 (85.9%), covers 98.1% of PF05656, 98.2 bits

ACIAD0937 conserved hypothetical protein; putative membrane protein from Acinetobacter sp. ADP1
Aligns to 116:218 / 219 (47.0%), covers 98.1% of PF05656, 95.6 bits

PG0198 conserved hypothetical protein from Porphyromonas gingivalis W83
Aligns to 11:164 / 179 (86.0%), covers 100.0% of PF05656, 95.1 bits

EG14_04805 DUF805 domain-containing protein from Porphyromonas gingivalis
Aligns to 11:164 / 179 (86.0%), covers 100.0% of PF05656, 95.1 bits

PGN_0306 hypothetical protein from Porphyromonas gingivalis ATCC 33277
Aligns to 112:265 / 280 (55.0%), covers 100.0% of PF05656, 94.9 bits

ACICU_03432 hypothetical protein from Acinetobacter baumannii ACICU
Aligns to 4:118 / 171 (67.3%), covers 98.1% of PF05656, 84.5 bits

M3Q_3669 DUF805 domain-containing protein from Acinetobacter baumannii TYTH-1
Aligns to 15:129 / 182 (63.2%), covers 98.1% of PF05656, 84.2 bits

lp_1702 integral membrane protein from Lactobacillus plantarum WCFS1
Aligns to 12:121 / 121 (90.9%), covers 91.6% of PF05656, 77.3 bits

Q9I5R2 DUF805 domain-containing protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PA0659 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 174:277 / 358 (29.1%), covers 99.1% of PF05656, 77.3 bits

YiiR / b3921 DUF805 domain-containing protein YiiR from Escherichia coli K-12 substr. MG1655 (see paper)
Aligns to 7:133 / 146 (87.0%), covers 99.1% of PF05656, 76.1 bits

LSA1296 Hypothetical integral membrane protein from Lactobacillus sakei subsp. sakei 23K
Aligns to 12:120 / 121 (90.1%), covers 90.7% of PF05656, 74.8 bits

SA2133 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 20:180 / 206 (78.2%), covers 100.0% of PF05656, 69.9 bits

MW2263 conserved hypothetical protein from Staphylococcus aureus subsp. aureus MW2
Aligns to 20:180 / 206 (78.2%), covers 100.0% of PF05656, 69.7 bits

Q2FVS2 DUF805 domain-containing protein from Staphylococcus aureus (strain NCTC 8325 / PS 47)
SAOUHSC_02620 hypothetical protein from Staphylococcus aureus subsp. aureus NCTC 8325
SAUSA300_2289 hypothetical protein from Staphylococcus aureus subsp. aureus USA300_FPR3757
SACOL2338 hypothetical protein from Staphylococcus aureus subsp. aureus COL
Aligns to 20:180 / 215 (74.9%), covers 100.0% of PF05656, 69.6 bits

DNA52_RS11730 DUF805 domain-containing protein from Lactiplantibacillus plantarum
Aligns to 67:185 / 423 (28.1%), covers 96.3% of PF05656, 68.9 bits

SAR2428 putative membrane protein from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 20:180 / 215 (74.9%), covers 100.0% of PF05656, 68.3 bits

A1S_3236 hypothetical protein from Acinetobacter baumannii ATCC 17978
Aligns to 1:84 / 137 (61.3%), covers 57.0% of PF05656, 65.6 bits

PMT1567 conserved hypothetical protein from Prochlorococcus marinus str. MIT 9313
Aligns to 14:107 / 108 (87.0%), covers 91.6% of PF05656, 64.9 bits

SSA_0718 Conserved uncharacterized protein from Streptococcus sanguinis SK36
Aligns to 12:166 / 364 (42.6%), covers 98.1% of PF05656, 64.7 bits

c0036 Hypothetical protein from Escherichia coli CFT073
LF82_004 DUF805 domain-containing protein from Escherichia coli LF82
Aligns to 14:121 / 121 (89.3%), covers 93.5% of PF05656, 64.4 bits

EF1089 conserved hypothetical protein from Enterococcus faecalis V583
Aligns to 12:124 / 131 (86.3%), covers 89.7% of PF05656, 63.6 bits

LSA1480 Hypothetical membrane protein from Lactobacillus sakei subsp. sakei 23K
Aligns to 24:155 / 168 (78.6%), covers 87.9% of PF05656, 48.4 bits

YPO0751 putative membrane protein from Yersinia pestis CO92
Aligns to 1:92 / 93 (98.9%), covers 85.0% of PF05656, 45.0 bits

llmg_1683 hypothetical protein from Lactococcus lactis subsp. cremoris MG1363
Aligns to 12:162 / 173 (87.3%), covers 74.8% of PF05656, 43.7 bits

WP_019293277 DUF805 domain-containing protein from Lactococcus petauri
Aligns to 12:129 / 129 (91.5%), covers 96.3% of PF05656, 41.7 bits

FOB71_RS15665 DUF805 domain-containing protein from Vibrio vulnificus
Aligns to 53:182 / 215 (60.5%), covers 93.5% of PF05656, 35.7 bits

Or search for genetic data about PF05656 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory