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Family Search for PF05832 (DUF846)

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Running HMMer for PF05832

PF05832 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NP_057162 Golgi apparatus membrane protein TVP23 homolog B isoform a from Homo sapiens
Aligns to 32:174 / 205 (69.8%), covers 100.0% of PF05832, 187.4 bits

Q8IQC1 Uncharacterized Golgi apparatus membrane protein-like protein CG5021 from Drosophila melanogaster
Aligns to 36:177 / 223 (63.7%), covers 99.3% of PF05832, 186.3 bits

SPBC2A9.05c DUF846 family protein from Schizosaccharomyces pombe
Aligns to 46:184 / 219 (63.5%), covers 100.0% of PF05832, 167.5 bits

LOC106757661 Golgi apparatus membrane protein-like protein ECHIDNA from Vigna radiata var. radiata
Aligns to 12:152 / 183 (77.0%), covers 99.3% of PF05832, 165.2 bits

Q5W723 Golgi apparatus membrane protein TVP23 from Oryza sativa subsp. japonica
Aligns to 12:152 / 187 (75.4%), covers 99.3% of PF05832, 164.0 bits

TVP23_ARATH / Q8LEK2 Golgi apparatus membrane protein-like protein ECHIDNA from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
NP_563842 golgi apparatus membrane protein-like protein ECHIDNA protein from Arabidopsis thaliana
AT1G09330 hypothetical protein from Arabidopsis thaliana
Aligns to 15:155 / 186 (75.8%), covers 99.3% of PF05832, 163.7 bits

TVP23_YEAST / P38962 Golgi apparatus membrane protein TVP23; TLG2 compartment vesicle protein of 23 kDa from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
NP_010369 Tvp23p from Saccharomyces cerevisiae S288C
YDR084C Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern from Saccharomyces cerevisiae
Aligns to 15:156 / 199 (71.4%), covers 100.0% of PF05832, 163.6 bits

LOC105135664 Golgi apparatus membrane protein-like protein ECHIDNA from Populus euphratica
Aligns to 12:152 / 183 (77.0%), covers 99.3% of PF05832, 160.4 bits

NP_660344 Golgi apparatus membrane protein TVP23 homolog C isoform 1 from Homo sapiens
Q96ET8 Golgi apparatus membrane protein TVP23 homolog C from Homo sapiens
Aligns to 32:167 / 276 (49.3%), covers 85.6% of PF05832, 153.6 bits

NP_001343450 Golgi apparatus membrane protein TVP23 homolog B isoform 3 precursor from Mus musculus
Aligns to 1:110 / 141 (78.0%), covers 76.3% of PF05832, 145.7 bits

K7EK95 Golgi apparatus membrane protein TVP23 homolog (Fragment) from Homo sapiens
Aligns to 1:54 / 60 (90.0%), covers 34.5% of PF05832, 41.7 bits

Or search for genetic data about PF05832 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory