PaperBLAST – Find papers about a protein or its homologs


Family Search for PF06004 (DUF903)

Running HMMer for PF06004

PF06004 hits 22 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

3fifF / P65294 Crystal structure of the ygdr protein from e.Coli. Northeast structural genomics target er382a.
Aligns to 3:51 / 56 (87.5%), covers 100.0% of PF06004, 85.9 bits

YgdR / b2833 DUF903 domain-containing lipoprotein YgdR from Escherichia coli K-12 substr. MG1655 (see 2 papers)
Aligns to 23:71 / 72 (68.1%), covers 100.0% of PF06004, 84.8 bits

YgdI / b2809 DUF903 domain-containing lipoprotein YgdI from Escherichia coli K-12 substr. MG1655 (see 3 papers)
Aligns to 24:72 / 75 (65.3%), covers 100.0% of PF06004, 84.7 bits

Or search for genetic data about PF06004 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory