PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06074 (DUF935)

PF06074.12 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

P44225 Mu-like prophage FluMu protein gp29 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
HI1501 H. influenzae predicted coding region HI1501 (NCBI ptt file) from Haemophilus influenzae Rd KW20
Aligns to 4:517 / 520 (98.8%), covers 100.0% of PF06074, 671.1 bits

SO_0667 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 9:532 / 533 (98.3%), covers 99.8% of PF06074, 657.6 bits

Q9JZE2 Uncharacterized protein from Neisseria meningitidis serogroup B (strain MC58)
NMB1095 hypothetical protein (NCBI) from Neisseria meningitidis MC58
Aligns to 2:519 / 522 (99.2%), covers 98.5% of PF06074, 622.5 bits

E3D4P0 Uncharacterized protein from Neisseria meningitidis serogroup B (strain alpha710)
NMY233_1071 DUF935 domain-containing protein from Neisseria meningitidis NM233
Aligns to 2:519 / 522 (99.2%), covers 98.5% of PF06074, 619.7 bits

A9LZ31 Uncharacterized protein from Neisseria meningitidis serogroup C (strain 053442)
Aligns to 1:519 / 522 (99.4%), covers 98.3% of PF06074, 619.2 bits

NMA1314 hypothetical protein NMA1314 (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 2:519 / 522 (99.2%), covers 98.5% of PF06074, 618.9 bits

NMA1851 conserved hypothetical protein (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 14:518 / 519 (97.3%), covers 96.7% of PF06074, 610.7 bits

PORTL_BPMU / Q9T1W5 Portal protein; Gene product 29; gp29; Gene product H; gpH; Head-tail connector from Escherichia phage Mu (Bacteriophage Mu) (see 2 papers)
NP_050633 DUF935 domain-containing protein from Escherichia phage Mu
Aligns to 3:507 / 512 (98.6%), covers 99.8% of PF06074, 601.1 bits

SO2680, SO_2680 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 3:519 / 521 (99.2%), covers 99.6% of PF06074, 577.9 bits

ECs4970 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 2:504 / 508 (99.0%), covers 94.8% of PF06074, 558.9 bits

plu3441 No description from Photorhabdus luminescens subsp. laumondii TTO1
Aligns to 13:492 / 497 (96.6%), covers 93.5% of PF06074, 461.3 bits

CV2139, NP_901809 conserved hypothetical protein (NCBI) from Chromobacterium violaceum ATCC 12472
Aligns to 17:487 / 488 (96.5%), covers 93.5% of PF06074, 456.6 bits

STY1616 hypothetical protein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Aligns to 16:493 / 498 (96.0%), covers 93.5% of PF06074, 448.8 bits

BB3631 phage-related conserved hypothetical protein (NCBI) from Bordetella bronchiseptica RB50
Aligns to 48:504 / 511 (89.4%), covers 86.3% of PF06074, 295.0 bits

CJE0250 hypothetical protein (NCBI) from Campylobacter jejuni RM1221
Aligns to 60:455 / 456 (86.8%), covers 79.4% of PF06074, 130.9 bits

Or search for genetic data about PF06074 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory