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Family Search for PF06110 (TXD17-like_Trx)

April 2024: GapMind for amino acid biosynthesis has been updated to include newly-discovered enzymes and comparative genomics predictions (see details)

Running HMMer for PF06110

PF06110 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Q9VMQ9 pyrimidodiazepine synthase (EC 1.5.4.1) from Drosophila melanogaster (see paper)
NP_001260098 clot, isoform B from Drosophila melanogaster
Aligns to 6:124 / 126 (94.4%), covers 100.0% of PF06110, 188.7 bits

NP_080835 thioredoxin domain-containing protein 17 from Mus musculus
Q9CQM5 Thioredoxin domain-containing protein 17 from Mus musculus
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 176.2 bits

B0K010 Thioredoxin domain-containing protein 17 from Rattus norvegicus
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 171.2 bits

Q5REA8 Thioredoxin domain-containing protein 17 from Pongo abelii
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 158.9 bits

TXD17_HUMAN / Q9BRA2 Thioredoxin domain-containing protein 17; 14 kDa thioredoxin-related protein; TRP14; Protein 42-9-9; Thioredoxin-like protein 5 from Homo sapiens (Human) (see 2 papers)
Q9BRA2 cystine reductase (EC 1.8.1.6) from Homo sapiens (see paper)
NP_116120 thioredoxin domain-containing protein 17 from Homo sapiens
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 158.9 bits

AT5G42850 hypothetical protein from Arabidopsis thaliana
Aligns to 1:132 / 134 (98.5%), covers 88.2% of PF06110, 154.3 bits

TXD17_EPICO / T1SH39 Thioredoxin domain-containing protein 17; 14 kDa thioredoxin-related protein; TRP14 from Epinephelus coioides (Orange-spotted grouper) (Epinephelus nebulosus) (see paper)
Aligns to 8:122 / 123 (93.5%), covers 100.0% of PF06110, 142.4 bits

Q5Z9Z3 Thioredoxin-like protein Clot from Oryza sativa subsp. japonica
A2YCB4 Thioredoxin domain-containing protein from Oryza sativa subsp. indica
Aligns to 9:137 / 139 (92.8%), covers 84.0% of PF06110, 103.6 bits

B6TP19 Thioredoxin-like protein 5 from Zea mays
Aligns to 9:135 / 138 (92.0%), covers 84.9% of PF06110, 100.6 bits

B8A1M2 Thioredoxin domain-containing protein from Zea mays
Aligns to 9:135 / 138 (92.0%), covers 84.9% of PF06110, 99.4 bits

I3L3M7 Thioredoxin domain-containing protein 17 from Homo sapiens
Aligns to 8:80 / 80 (91.2%), covers 60.5% of PF06110, 91.8 bits

M7XZL4 Thioredoxin-like protein 5 from Rhodotorula toruloides (strain NP11)
Aligns to 10:122 / 131 (86.3%), covers 78.2% of PF06110, 57.0 bits

YOSC_SCHPO / Q9P7L1 Thioredoxin domain-containing protein C21C3.12c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 4:116 / 124 (91.1%), covers 78.2% of PF06110, 53.2 bits

HMU14090 putative thioredoxin TrxA from Helicobacter mustelae 12198
Aligns to 14:103 / 103 (87.4%), covers 55.5% of PF06110, 33.8 bits

HP1458 thioredoxin from Helicobacter pylori 26695
O25996 Thioredoxin from Helicobacter pylori (strain ATCC 700392 / 26695)
Aligns to 3:100 / 104 (94.2%), covers 62.2% of PF06110, 30.5 bits

jhp1351 putative THIOREDOXIN from Helicobacter pylori J99
Aligns to 6:98 / 104 (89.4%), covers 62.2% of PF06110, 30.3 bits

HPG27_RS07230 thioredoxin family protein from Helicobacter pylori G27
Aligns to 3:100 / 104 (94.2%), covers 61.3% of PF06110, 29.8 bits

HCD_00885 thioredoxin family protein from Helicobacter cetorum MIT 99-5656
Aligns to 9:98 / 104 (86.5%), covers 58.0% of PF06110, 28.2 bits

Or search for genetic data about PF06110 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory