Family Search for PF06159 (DUF974)

PF06159 hits 7 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NP_001087224 trafficking protein particle complex subunit 13 isoform 1 from Homo sapiens
Aligns to 65:298 / 418 (56.0%), covers 100.0% of PF06159, 287.0 bits

• TRAPPC13 modulates autophagy and the response to Golgi stress.
  Ramírez-Peinado, Journal of cell science 2017
  • GeneRIF: Results lend support for the existence of a mammalian TRAPPIII complex containing TRAPPC13, which is important for autophagic flux under certain stress conditions.

TPC13_HUMAN / A5PLN9 Trafficking protein particle complex subunit 13 from Homo sapiens (Human) (see paper)
Aligns to 65:298 / 417 (56.1%), covers 100.0% of PF06159, 286.9 bits

• subunit: Part of the multisubunit TRAPP (transport protein particle) complex.

B7ZLB7 Trafficking protein particle complex subunit 13 (Fragment) from Homo sapiens
Aligns to 54:281 / 400 (57.0%), covers 100.0% of PF06159, 284.5 bits

• Quantitative proteomic analysis for high-throughput screening of differential glycoproteins in hepatocellular carcinoma serum
  Gao, Cancer biology & medicine 2015
  • “...(MYCBPAP), mRNA OS=Homo sapiens PE=2 SV=1 - [B3KXV2_HUMAN] 1.94 4 1 1 774 88.8 6.87 B7ZLB7 C5orf44 protein (Fragment) OS=Homo sapiens GN=C5orf44 PE=2 SV=1 - [B7ZLB7_HUMAN] 5.50 3 1 1 400 44.6 5.73 B5MCM0 Uncharacterized protein OS=Homo sapiens GN=TEAD3 PE=4 SV=1 - [B5MCM0_HUMAN] 5.87 8 1...”

NP_609365 uncharacterized protein from Drosophila melanogaster
Aligns to 64:290 / 438 (51.8%), covers 100.0% of PF06159, 260.9 bits

• The two TRAPP complexes of metazoans have distinct roles and act on different Rab GTPases
  Riedel, The Journal of cell biology 2018
  • “...into pIDS; meanwhile, the other two TRAPP3 subunits C12 ( NP_649255 ) and C13 ( NP_609365 ) were inserted into pIDC. Cre recombinase (New England Biolabs, Inc.) was used to fuse the appropriate pID vectors with pACEBac1-C1-C6 to generate a plasmids for the coexpression of all...”

Smp_016810 hypothetical protein from Schistosoma mansoni
Aligns to 89:411 / 567 (57.0%), covers 99.6% of PF06159, 191.6 bits

• Landscape of the spliced leader trans-splicing mechanism in Schistosoma mansoni
  Boroni, Scientific reports 2018
  • “...Trapping dataset with high read counts (Smp_079840, Smp_097280, Smp_106390 and Smp_194020) and low read counts (Smp_016810 and Smp_052160) (Fig. 2 ). In all cases amplifications were made by using the SL sequence as forward primer and a gene-specific reverse primer designed for the first exon of...”
  • “...The structure of genes with high (Smp_079840, Smp_097280, Smp_106390 and Smp_194020) and low read counts (Smp_016810 and Smp_052160), as well as the gene structure of a tricistronic transcript constituted by the genes Smp_033590, Smp_210160 and Smp_210170, and a dicistronic transcript, constituted by the genes Smp_062830 and...”

TGME49_057020 hypothetical protein from Toxoplasma gondii ME49
Aligns to 62:289 / 404 (56.4%), covers 97.6% of PF06159, 130.6 bits

• Identification and real-time expression analysis of selected Toxoplasma gondii in-vivo induced antigens recognized by IgG and IgM in sera of acute toxoplasmosis patients
  Amerizadeh, BMC infectious diseases 2013
  • “...Description Homology percentage 1 7895406 TGME49_026460 hypothetical protein Toxoplasma gondiiME49 hypothetical protein 99% 2 7898829 TGME49_057020 hypothetical protein Toxoplasma gondiiME49 hypothetical protein 86% 3 7894091 TGME49_030160 hypothetical protein Toxoplasma gondiiME49 hypothetical protein 97% 4 7900912 TGME49_066920 phosphodiesterase Toxoplasma gondii ME49 phosphodiesterase, putative, mRNA 97% 5 7899945...”

PVX_097600 hypothetical protein, conserved from Plasmodium vivax
Aligns to 55:269 / 381 (56.4%), covers 83.3% of PF06159, 61.1 bits

• Genomic variation in Plasmodium vivax malaria reveals regions under selective pressure
  Diez, PloS one 2017
  • “...SA, T 10 1272354 1274193 3.869 PVX_097660 4-diphosphocytidyl-2-C-methyl- kinase, IspE SA 10 1306384 1308153 5.991 PVX_097600 hypothetical protein, conserved SA 12 751041 752204 5.578 PVX_082710 hypothetical protein SA 13 37121 59181 3.876 PVX_084160 dynein heavy chain, putative SA 13 128618 131751 4.099 PVX_084260 hypothetical protein, conserved...”

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