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Family Search for PF06252 (DUF1018)

PF06252.12 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BCAS0553 Mu gp16 gemA (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 28:141 / 146 (78.1%), covers 100.0% of PF06252, 133.6 bits

SO2667 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 17:137 / 177 (68.4%), covers 100.0% of PF06252, 121.8 bits

HD0110 Mu-like phage E16 protein (NCBI) from Haemophilus ducreyi 35000HP
Aligns to 22:151 / 154 (84.4%), covers 100.0% of PF06252, 118.9 bits

HI1488 E16 protein, putative (NCBI ptt file) from Haemophilus influenzae Rd KW20
Aligns to 20:151 / 185 (71.4%), covers 100.0% of PF06252, 106.0 bits

ECs4960 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 18:140 / 169 (72.8%), covers 100.0% of PF06252, 104.2 bits

GEMA_BPMU / Q38494 GemA protein; Gene product 16; gp16 from Escherichia phage Mu (Bacteriophage Mu) (see paper)
Aligns to 19:140 / 183 (66.7%), covers 100.0% of PF06252, 102.2 bits

NMY220_0962, NMY233_0948 gp16 family protein from Neisseria meningitidis NM233
Aligns to 18:130 / 144 (78.5%), covers 99.2% of PF06252, 100.5 bits

NMB0985 E16-related protein (NCBI) from Neisseria meningitidis MC58
Aligns to 39:151 / 165 (68.5%), covers 99.2% of PF06252, 99.9 bits

NMA1186 hypothetical protein NMA1186 (NCBI ptt file) from Neisseria meningitidis Z2491
NMA1301 hypothetical protein NMA1301 (NCBI ptt file) from Neisseria meningitidis Z2491
Aligns to 38:150 / 164 (68.9%), covers 99.2% of PF06252, 97.4 bits

NCGM2_4888 regulatory protein GemA from Pseudomonas aeruginosa NCGM2.S1
Aligns to 20:132 / 188 (60.1%), covers 99.2% of PF06252, 79.1 bits

CJE0258 hypothetical protein (NCBI) from Campylobacter jejuni RM1221
Aligns to 25:145 / 149 (81.2%), covers 96.6% of PF06252, 61.8 bits

HH_0755 DUF1018 domain-containing protein from Helicobacter hepaticus ATCC 51449
Aligns to 23:126 / 128 (81.2%), covers 94.1% of PF06252, 36.5 bits

Or search for genetic data about PF06252 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory