PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06688 (DUF1187)

PF06688.11 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

ECs1931 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 2:62 / 62 (98.4%), covers 100.0% of PF06688, 132.2 bits

YdaC / b1347 Rac prophage; double-strand break reduction protein from Escherichia coli K-12 substr. MG1655 (see 4 papers)
RCBA_ECOLI / P33230 Double-strand break reduction protein from Escherichia coli (strain K12) (see 2 papers)
ydaC / ECOCYC|EG11901-MONOMER uncharacterized protein ydaC from Escherichia coli K12 (see 2 papers)
b1347 Rac prophage; predicted protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 2:62 / 69 (88.4%), covers 100.0% of PF06688, 131.7 bits

Z2413 unknown protein encoded within prophage CP-933R (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 26:86 / 86 (70.9%), covers 100.0% of PF06688, 130.8 bits

STY2075 conserved hypothetical protein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Aligns to 2:62 / 62 (98.4%), covers 100.0% of PF06688, 129.5 bits

Or search for genetic data about PF06688 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory