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Family Search for PF06736 (DUF1211)

PF06736.11 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

TM175_HUMAN / Q9BSA9 Endosomal/lysosomal potassium channel TMEM175; Transmembrane protein 175; hTMEM175 from Homo sapiens (Human) (see 3 papers)
TC 1.A.78.1.1 / Q9BSA9 Endosomal/Lysosomal K+ channel of 504 aas and 12 TMSs with two 6 TMS repeat units, KEL or TMEM175 from Homo sapiens
2 alignments in 35:356 / 504 (37.1%), covering up to 100.0% of PF06736, 147.9 bits

TM175_MOUSE / Q9CXY1 Endosomal/lysosomal potassium channel TMEM175; Transmembrane protein 175; mTMEM175 from Mus musculus (Mouse) (see paper)
XP_006535293 endosomal/lysosomal potassium channel TMEM175 isoform X1 from Mus musculus
2 alignments in 32:353 / 499 (37.5%), covering up to 100.0% of PF06736, 141.0 bits

TM175_RAT / Q6AY05 Endosomal/lysosomal potassium channel TMEM175; Transmembrane protein 175 from Rattus norvegicus (Rat) (see paper)
NP_001014013 endosomal/lysomomal potassium channel TMEM175 from Rattus norvegicus
2 alignments in 32:353 / 499 (37.5%), covering up to 100.0% of PF06736, 139.6 bits

TM175_CHRP1 / A0A086F3E3 Potassium channel HX13_20290 from Chryseobacterium sp. (strain P1-3) (see paper)
Aligns to 5:89 / 192 (44.3%), covers 100.0% of PF06736, 109.8 bits

TM175_STRC3 / S5VBU1 Potassium channel B446_29190 from Streptomyces collinus (strain DSM 40733 / Tue 365) (see paper)
Aligns to 6:94 / 206 (43.2%), covers 100.0% of PF06736, 107.7 bits

TM175_CHAP6 / K9UJK2 Potassium channel Cha6605_3372; Transmembrane protein 175; CmTMEM175 from Chamaesiphon minutus (strain ATCC 27169 / PCC 6605) (see paper)
Aligns to 12:102 / 203 (44.8%), covers 100.0% of PF06736, 94.4 bits

NP_001284356 endosomal/lysosomal potassium channel TMEM175 isoform 3 from Homo sapiens
Aligns to 144:240 / 388 (25.0%), covers 100.0% of PF06736, 81.8 bits

CC0228 conserved hypothetical protein (NCBI ptt file) from Caulobacter crescentus CB15
Aligns to 32:118 / 223 (39.0%), covers 100.0% of PF06736, 79.3 bits

LOC100206560 transmembrane protein 175-like from Hydra vulgaris
2 alignments in 31:349 / 526 (35.0%), covering up to 100.0% of PF06736, 73.6 bits

LACR_1506 Predicted integral membrane protein (NCBI) from Lactococcus lactis subsp. cremoris SK11
Aligns to 14:99 / 193 (44.6%), covers 100.0% of PF06736, 69.7 bits

gbs0300 unknown (NCBI ptt file) from Streptococcus agalactiae NEM316
Aligns to 7:89 / 234 (35.5%), covers 100.0% of PF06736, 68.9 bits

NCDO2118_0727 DUF1211 domain-containing protein from Lactococcus lactis subsp. lactis NCDO 2118
Aligns to 6:91 / 203 (42.4%), covers 100.0% of PF06736, 67.9 bits

lmo0419 similar to unknown protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 5:89 / 184 (46.2%), covers 100.0% of PF06736, 67.1 bits

LACR_0140 Predicted integral membrane protein (NCBI) from Lactococcus lactis subsp. cremoris SK11
Aligns to 10:78 / 172 (40.1%), covers 76.5% of PF06736, 56.5 bits

E4TN31 Uncharacterized protein from Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43)
Aligns to 24:108 / 247 (34.4%), covers 96.5% of PF06736, 52.3 bits

MUL_3985 hypothetical protein (NCBI) from Mycobacterium ulcerans Agy99
Aligns to 1:65 / 183 (35.5%), covers 68.2% of PF06736, 43.9 bits

Or search for genetic data about PF06736 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory