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Family Search for PF06889 (DUF1266)

PF06889.11 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

EC042_RS03510 DUF1266 domain-containing protein from Escherichia coli 042
Aligns to 40:216 / 235 (75.3%), covers 99.4% of PF06889, 145.5 bits

SSGG_04898 DUF1266 domain-containing protein from Streptomyces filamentosus NRRL 15998
Aligns to 200:394 / 395 (49.4%), covers 100.0% of PF06889, 142.4 bits

YbeR / b0645 DUF1266 domain-containing protein YbeR from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P77627 Uncharacterized protein YbeR from Escherichia coli (strain K12)
Aligns to 40:216 / 235 (75.3%), covers 99.4% of PF06889, 140.8 bits

SeKA_A0118 DUF1266 domain-containing protein from Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188
Aligns to 43:215 / 234 (73.9%), covers 99.4% of PF06889, 140.3 bits

AEX15_00985 DUF1266 domain-containing protein from Salmonella enterica subsp. enterica serovar Kentucky
Aligns to 40:212 / 231 (74.9%), covers 99.4% of PF06889, 136.5 bits

YbeU / b0648 DUF1266 domain-containing protein YbeU from Escherichia coli K-12 substr. MG1655
b0648 predicted tRNA ligase (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 40:216 / 235 (75.3%), covers 99.4% of PF06889, 129.6 bits

Bd3309 hypothetical protein (NCBI) from Bdellovibrio bacteriovorus HD100
Aligns to 79:255 / 256 (69.1%), covers 99.4% of PF06889, 126.9 bits

SEEHRA37_23678 DUF1266 domain-containing protein from Salmonella enterica subsp. enterica serovar Heidelberg str. SARA37
Aligns to 40:216 / 235 (75.3%), covers 99.4% of PF06889, 126.8 bits

Pfl01_1884 hypothetical protein (RefSeq) from Pseudomonas fluorescens Pf0-1
Aligns to 37:212 / 231 (76.2%), covers 84.1% of PF06889, 108.3 bits

O3K_11150 DUF1266 domain-containing protein from Escherichia coli O104:H4 str. 2011C-3493
Aligns to 167:338 / 346 (49.7%), covers 100.0% of PF06889, 86.3 bits

YnjI / b1762 DUF1266 domain-containing protein YnjI from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b1762 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 167:338 / 346 (49.7%), covers 100.0% of PF06889, 85.2 bits

STM2134 putative inner membrane protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 20:229 / 238 (88.2%), covers 73.3% of PF06889, 63.4 bits

PMI0608 hypothetical protein (RefSeq) from Proteus mirabilis HI4320
Aligns to 94:272 / 317 (56.5%), covers 94.3% of PF06889, 63.3 bits

Or search for genetic data about PF06889 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory