PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06932 (DUF1283)

PF06932.11 hits 5 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

STM1503 putative periplasmic protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 31:113 / 113 (73.5%), covers 98.8% of PF06932, 142.4 bits

YnfB / b1583 DUF1283 domain-containing protein YnfB from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ynfB / RF|NP_416100 UPF0482 protein ynfB from Escherichia coli K12 (see paper)
b1583 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
P76170 UPF0482 protein YnfB from Escherichia coli (strain K12)
Aligns to 31:113 / 113 (73.5%), covers 98.8% of PF06932, 141.6 bits

KPN_01584 hypothetical protein (RefSeq) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Aligns to 31:113 / 113 (73.5%), covers 98.8% of PF06932, 141.4 bits

ECs2289 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 31:113 / 113 (73.5%), covers 98.8% of PF06932, 139.8 bits

YPTB2194 hypothetical protein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 41:124 / 124 (67.7%), covers 98.8% of PF06932, 122.5 bits

Or search for genetic data about PF06932 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory