Family Search for PF06940 (DUF1287)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF06940 hits 2 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YijF / b3944 DUF1287 domain-containing protein YijF from Escherichia coli K-12 substr. MG1655 (see paper)
b3944 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 40:202 / 205 (79.5%), covers 99.4% of PF06940, 242.2 bits

• Analysis of promoter targets for Escherichia coli transcription elongation factor GreA in vivo and in vitro
  Stepanova, Journal of bacteriology 2007
  • “...2.1 1.8 Predicted inner membrane protein (yieI) c yijF b3944 1.9 1.6 Conserved protein yjfZc b4204 1.8 1.9 ORF, hypothetical protein a b c Genes comprising...”

PA1573 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 34:195 / 198 (81.8%), covers 100.0% of PF06940, 226.1 bits

• Influence of O polysaccharides on biofilm development and outer membrane vesicle biogenesis in Pseudomonas aeruginosa PAO1
  Murphy, Journal of bacteriology 2014
  • “...PA4937 PA3961 PA0623 PA2424 PA4226 PA0186 PA0172 PA2402 PA0622 PA1573 PA5253 PA1628 PA1031 PA4225 PA2787 ftsK gltP ambE phaF gltB gor ptpA rnr pvdL pchE siaA...”

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