PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06972 (DUF1296)

PF06972.11 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AT4G18150 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 15:73 / 758 (7.8%), covers 100.0% of PF06972, 106.3 bits

AT1G29350 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 17:75 / 831 (7.1%), covers 100.0% of PF06972, 105.4 bits

AT1G29370 kinase-related (RefSeq) from Arabidopsis thaliana
Aligns to 17:75 / 831 (7.1%), covers 100.0% of PF06972, 105.3 bits

AT3G07660 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 10:70 / 841 (7.3%), covers 100.0% of PF06972, 103.5 bits

K7UTH3 GBF-interacting protein 1 from Zea mays
Aligns to 15:73 / 856 (6.9%), covers 100.0% of PF06972, 100.4 bits

AT3G13990 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 15:74 / 848 (7.1%), covers 96.7% of PF06972, 99.1 bits

GIP1_ARATH / Q8VZS6 GBF-interacting protein 1 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
NP_187929 GBF-interacting protein 1 from Arabidopsis thaliana
Aligns to 14:74 / 567 (10.8%), covers 100.0% of PF06972, 97.9 bits

GIP1L_ARATH / A4FVR1 GBF-interacting protein 1-like; Protein GIP1-like from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 13:73 / 575 (10.6%), covers 100.0% of PF06972, 93.9 bits

Or search for genetic data about PF06972 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory