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Family Search for PF06980 (DUF1302)

PF06980.11 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

PP0765 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
PP_0765 DUF1302 domain-containing protein from Pseudomonas putida KT2440
Aligns to 31:628 / 628 (95.2%), covers 100.0% of PF06980, 773.9 bits

PA14_13130 hypothetical protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
Aligns to 31:641 / 641 (95.3%), covers 100.0% of PF06980, 769.0 bits

PA3923 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 31:641 / 641 (95.3%), covers 100.0% of PF06980, 768.7 bits

PflA506_0906 DUF1302 domain-containing protein from Pseudomonas fluorescens A506
Aligns to 31:619 / 619 (95.2%), covers 100.0% of PF06980, 767.8 bits

PA14_19810 hypothetical protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
PA3422 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 31:585 / 585 (94.9%), covers 100.0% of PF06980, 737.5 bits

Psest_1122 predicted exporter of cell wall component, with DUF1329, BNR, and RND proteins (Psest_1123, Psest_1923, Psest_1924) from Pseudomonas stutzeri RCH2
Aligns to 31:601 / 601 (95.0%), covers 99.8% of PF06980, 710.3 bits

Sama_1588 predicted exporter of cell wall component, with DUF1329, BNR, and RND proteins (Sama_1589, Sama_1590, Sama_1591) from Shewanella amazonensis SB2B
Aligns to 32:691 / 691 (95.5%), covers 99.8% of PF06980, 668.7 bits

gbt / Q9HZC6 glycine betaine transmethylase (EC 2.1.1.5) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
PA3082 glycine betaine transmethylase (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 36:654 / 654 (94.6%), covers 99.3% of PF06980, 618.5 bits

B158DRAFT_0994 predicted exporter of cell wall component, with DUF1329, BNR, and RND proteins (B158DRAFT_0995, B158DRAFT_0996, B158DRAFT_0997) from Kangiella aquimarina DSM 16071
Aligns to 36:637 / 637 (94.5%), covers 99.8% of PF06980, 577.5 bits

Kkor_1992 protein of unknown function DUF1302 (RefSeq) from Kangiella koreensis DSM 16069
Aligns to 36:637 / 637 (94.5%), covers 99.8% of PF06980, 566.9 bits

DBX28_14755 DUF1302 domain-containing protein from Pseudomonas aeruginosa
Aligns to 4:528 / 528 (99.4%), covers 99.6% of PF06980, 479.8 bits

Pfl01_2750 hypothetical protein (RefSeq) from Pseudomonas fluorescens Pf0-1
Aligns to 24:548 / 548 (95.8%), covers 99.8% of PF06980, 479.1 bits

ebA1936 DUF1302 domain-containing protein from Aromatoleum aromaticum EbN1
ebA1936 hypothetical protein (NCBI) from Azoarcus sp. EbN1
Aligns to 40:561 / 561 (93.0%), covers 99.8% of PF06980, 450.1 bits

O87938 Uncharacterized protein from Thauera aromatica
Aligns to 43:564 / 564 (92.6%), covers 99.6% of PF06980, 444.1 bits

ebA335 hypothetical protein (NCBI) from Azoarcus sp. EbN1
ebA335 DUF1302 domain-containing protein from Aromatoleum aromaticum EbN1
Aligns to 40:561 / 561 (93.0%), covers 99.8% of PF06980, 438.8 bits

DelCs14_1756 DUF1302 family protein from Delftia sp. Cs1-4
Aligns to 39:557 / 557 (93.2%), covers 99.6% of PF06980, 383.3 bits

Or search for genetic data about PF06980 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory